Gene : Brara.D00291 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR21027 - TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54 Genomic Order:  291
Name:  ? Brara.D00291 Secondary Identifier:  ? PAC:30621937
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00291 0.5kb upstream 0.5kb upstream 1701 true A04: 2011376-2013076 Brassica rapa FPsc
Brara.D00291 0.5kb upstream 0.5kb upstream 500 false A04: 2012577-2013076 Brassica rapa FPsc
Brara.D00291 0.5kb downstream 0.5kb downstream 1701 true A04: 2010876-2012576 Brassica rapa FPsc
Brara.D00291 0.5kb downstream 0.5kb downstream 500 false A04: 2010876-2011375 Brassica rapa FPsc
Brara.D00291 1.0kb upstream 1.0kb upstream 2201 true A04: 2011376-2013576 Brassica rapa FPsc
Brara.D00291 1.0kb upstream 1.0kb upstream 1000 false A04: 2012577-2013576 Brassica rapa FPsc
Brara.D00291 1.0kb downstream 1.0kb downstream 2201 true A04: 2010376-2012576 Brassica rapa FPsc
Brara.D00291 1.0kb downstream 1.0kb downstream 1000 false A04: 2010376-2011375 Brassica rapa FPsc
Brara.D00291 2.0kb upstream 2.0kb upstream 3201 true A04: 2011376-2014576 Brassica rapa FPsc
Brara.D00291 2.0kb upstream 2.0kb upstream 2000 false A04: 2012577-2014576 Brassica rapa FPsc
Brara.D00291 2.0kb downstream 2.0kb downstream 3201 true A04: 2009376-2012576 Brassica rapa FPsc
Brara.D00291 2.0kb downstream 2.0kb downstream 2000 false A04: 2009376-2011375 Brassica rapa FPsc
Brara.D00291 5.0kb upstream 5.0kb upstream 6201 true A04: 2011376-2017576 Brassica rapa FPsc
Brara.D00291 5.0kb upstream 5.0kb upstream 5000 false A04: 2012577-2017576 Brassica rapa FPsc
Brara.D00291 5.0kb downstream 5.0kb downstream 6201 true A04: 2006376-2012576 Brassica rapa FPsc
Brara.D00291 5.0kb downstream 5.0kb downstream 5000 false A04: 2006376-2011375 Brassica rapa FPsc
Brara.D00291 10.0kb upstream 10.0kb upstream 11201 true A04: 2011376-2022576 Brassica rapa FPsc
Brara.D00291 10.0kb upstream 10.0kb upstream 10000 false A04: 2012577-2022576 Brassica rapa FPsc
Brara.D00291 10.0kb downstream 10.0kb downstream 11201 true A04: 2001376-2012576 Brassica rapa FPsc
Brara.D00291 10.0kb downstream 10.0kb downstream 10000 false A04: 2001376-2011375 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122348738 5261 Brassicaceae Singleton cluster - no MSA
123839324 5264 Brassicales-Malvales View MSA
124351445 5266 SBM View MSA
124243740 5268 Malvidae View MSA
124066915 5270 Rosid View MSA
123737661 5271 Pentapetalae View MSA
122790630 5272 Eudicot View MSA
122051332 5273 Angiosperm View MSA
121351548 5274 Embryophyte View MSA
123382220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier