Gene : Brara.F00797 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR12161:SF23 - REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN Genomic Order:  797
Name:  ? Brara.F00797 Secondary Identifier:  ? PAC:30627977
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00797 0.5kb upstream 0.5kb upstream 2383 true A06: 4453383-4455765 Brassica rapa FPsc
Brara.F00797 0.5kb upstream 0.5kb upstream 500 false A06: 4453383-4453882 Brassica rapa FPsc
Brara.F00797 0.5kb downstream 0.5kb downstream 2383 true A06: 4453883-4456265 Brassica rapa FPsc
Brara.F00797 0.5kb downstream 0.5kb downstream 500 false A06: 4455766-4456265 Brassica rapa FPsc
Brara.F00797 1.0kb upstream 1.0kb upstream 2883 true A06: 4452883-4455765 Brassica rapa FPsc
Brara.F00797 1.0kb upstream 1.0kb upstream 1000 false A06: 4452883-4453882 Brassica rapa FPsc
Brara.F00797 1.0kb downstream 1.0kb downstream 2883 true A06: 4453883-4456765 Brassica rapa FPsc
Brara.F00797 1.0kb downstream 1.0kb downstream 1000 false A06: 4455766-4456765 Brassica rapa FPsc
Brara.F00797 2.0kb upstream 2.0kb upstream 3883 true A06: 4451883-4455765 Brassica rapa FPsc
Brara.F00797 2.0kb upstream 2.0kb upstream 2000 false A06: 4451883-4453882 Brassica rapa FPsc
Brara.F00797 2.0kb downstream 2.0kb downstream 3883 true A06: 4453883-4457765 Brassica rapa FPsc
Brara.F00797 2.0kb downstream 2.0kb downstream 2000 false A06: 4455766-4457765 Brassica rapa FPsc
Brara.F00797 5.0kb upstream 5.0kb upstream 6883 true A06: 4448883-4455765 Brassica rapa FPsc
Brara.F00797 5.0kb upstream 5.0kb upstream 5000 false A06: 4448883-4453882 Brassica rapa FPsc
Brara.F00797 5.0kb downstream 5.0kb downstream 6883 true A06: 4453883-4460765 Brassica rapa FPsc
Brara.F00797 5.0kb downstream 5.0kb downstream 5000 false A06: 4455766-4460765 Brassica rapa FPsc
Brara.F00797 10.0kb upstream 10.0kb upstream 11883 true A06: 4443883-4455765 Brassica rapa FPsc
Brara.F00797 10.0kb upstream 10.0kb upstream 10000 false A06: 4443883-4453882 Brassica rapa FPsc
Brara.F00797 10.0kb downstream 10.0kb downstream 11883 true A06: 4453883-4465765 Brassica rapa FPsc
Brara.F00797 10.0kb downstream 10.0kb downstream 10000 false A06: 4455766-4465765 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122350178 5261 Brassicaceae Singleton cluster - no MSA
123841424 5264 Brassicales-Malvales View MSA
124337126 5266 SBM View MSA
124241969 5268 Malvidae View MSA
124066653 5270 Rosid View MSA
123752989 5271 Pentapetalae View MSA
122793014 5272 Eudicot View MSA
122045384 5273 Angiosperm View MSA
121350449 5274 Embryophyte View MSA
123424640 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier