Gene : Brara.D00117 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR21660//PTHR21660:SF12 - THIOESTERASE SUPERFAMILY MEMBER-RELATED Genomic Order:  117
Name:  ? Brara.D00117 Secondary Identifier:  ? PAC:30621552
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1121 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-321 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5148 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6733 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-735 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00117 0.5kb upstream 0.5kb upstream 1490 true A04: 774935-776424 Brassica rapa FPsc
Brara.D00117 0.5kb upstream 0.5kb upstream 500 false A04: 774935-775434 Brassica rapa FPsc
Brara.D00117 0.5kb downstream 0.5kb downstream 1490 true A04: 775435-776924 Brassica rapa FPsc
Brara.D00117 0.5kb downstream 0.5kb downstream 500 false A04: 776425-776924 Brassica rapa FPsc
Brara.D00117 1.0kb upstream 1.0kb upstream 1990 true A04: 774435-776424 Brassica rapa FPsc
Brara.D00117 1.0kb upstream 1.0kb upstream 1000 false A04: 774435-775434 Brassica rapa FPsc
Brara.D00117 1.0kb downstream 1.0kb downstream 1990 true A04: 775435-777424 Brassica rapa FPsc
Brara.D00117 1.0kb downstream 1.0kb downstream 1000 false A04: 776425-777424 Brassica rapa FPsc
Brara.D00117 2.0kb upstream 2.0kb upstream 2990 true A04: 773435-776424 Brassica rapa FPsc
Brara.D00117 2.0kb upstream 2.0kb upstream 2000 false A04: 773435-775434 Brassica rapa FPsc
Brara.D00117 2.0kb downstream 2.0kb downstream 2990 true A04: 775435-778424 Brassica rapa FPsc
Brara.D00117 2.0kb downstream 2.0kb downstream 2000 false A04: 776425-778424 Brassica rapa FPsc
Brara.D00117 5.0kb upstream 5.0kb upstream 5990 true A04: 770435-776424 Brassica rapa FPsc
Brara.D00117 5.0kb upstream 5.0kb upstream 5000 false A04: 770435-775434 Brassica rapa FPsc
Brara.D00117 5.0kb downstream 5.0kb downstream 5990 true A04: 775435-781424 Brassica rapa FPsc
Brara.D00117 5.0kb downstream 5.0kb downstream 5000 false A04: 776425-781424 Brassica rapa FPsc
Brara.D00117 10.0kb upstream 10.0kb upstream 10990 true A04: 765435-776424 Brassica rapa FPsc
Brara.D00117 10.0kb upstream 10.0kb upstream 10000 false A04: 765435-775434 Brassica rapa FPsc
Brara.D00117 10.0kb downstream 10.0kb downstream 10990 true A04: 775435-786424 Brassica rapa FPsc
Brara.D00117 10.0kb downstream 10.0kb downstream 10000 false A04: 776425-786424 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363895 5261 Brassicaceae View MSA
123827579 5264 Brassicales-Malvales View MSA
124351057 5266 SBM View MSA
124244489 5268 Malvidae View MSA
124063594 5270 Rosid View MSA
123749451 5271 Pentapetalae View MSA
122793773 5272 Eudicot View MSA
122044050 5273 Angiosperm View MSA
121310231 5274 Embryophyte View MSA
123428627 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier