Gene : Brara.F00716 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR10210:SF45 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 3, CHLOROPLASTIC Genomic Order:  716
Name:  ? Brara.F00716 Secondary Identifier:  ? PAC:30628222
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY0-662 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F00716 0.5kb upstream 0.5kb upstream 2877 true A06: 4081344-4084220 Brassica rapa FPsc
Brara.F00716 0.5kb upstream 0.5kb upstream 500 false A06: 4081344-4081843 Brassica rapa FPsc
Brara.F00716 0.5kb downstream 0.5kb downstream 2877 true A06: 4081844-4084720 Brassica rapa FPsc
Brara.F00716 0.5kb downstream 0.5kb downstream 500 false A06: 4084221-4084720 Brassica rapa FPsc
Brara.F00716 1.0kb upstream 1.0kb upstream 3377 true A06: 4080844-4084220 Brassica rapa FPsc
Brara.F00716 1.0kb upstream 1.0kb upstream 1000 false A06: 4080844-4081843 Brassica rapa FPsc
Brara.F00716 1.0kb downstream 1.0kb downstream 3377 true A06: 4081844-4085220 Brassica rapa FPsc
Brara.F00716 1.0kb downstream 1.0kb downstream 1000 false A06: 4084221-4085220 Brassica rapa FPsc
Brara.F00716 2.0kb upstream 2.0kb upstream 4377 true A06: 4079844-4084220 Brassica rapa FPsc
Brara.F00716 2.0kb upstream 2.0kb upstream 2000 false A06: 4079844-4081843 Brassica rapa FPsc
Brara.F00716 2.0kb downstream 2.0kb downstream 4377 true A06: 4081844-4086220 Brassica rapa FPsc
Brara.F00716 2.0kb downstream 2.0kb downstream 2000 false A06: 4084221-4086220 Brassica rapa FPsc
Brara.F00716 5.0kb upstream 5.0kb upstream 7377 true A06: 4076844-4084220 Brassica rapa FPsc
Brara.F00716 5.0kb upstream 5.0kb upstream 5000 false A06: 4076844-4081843 Brassica rapa FPsc
Brara.F00716 5.0kb downstream 5.0kb downstream 7377 true A06: 4081844-4089220 Brassica rapa FPsc
Brara.F00716 5.0kb downstream 5.0kb downstream 5000 false A06: 4084221-4089220 Brassica rapa FPsc
Brara.F00716 10.0kb upstream 10.0kb upstream 12377 true A06: 4071844-4084220 Brassica rapa FPsc
Brara.F00716 10.0kb upstream 10.0kb upstream 10000 false A06: 4071844-4081843 Brassica rapa FPsc
Brara.F00716 10.0kb downstream 10.0kb downstream 12377 true A06: 4081844-4094220 Brassica rapa FPsc
Brara.F00716 10.0kb downstream 10.0kb downstream 10000 false A06: 4084221-4094220 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373386 5261 Brassicaceae View MSA
123833850 5264 Brassicales-Malvales View MSA
124338724 5266 SBM View MSA
124238778 5268 Malvidae View MSA
124068369 5270 Rosid View MSA
123738172 5271 Pentapetalae View MSA
122787555 5272 Eudicot View MSA
122048410 5273 Angiosperm View MSA
121347977 5274 Embryophyte View MSA
123424356 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier