Gene : Brara.D00183 B. rapa FPsc v1.3
Defline:  (1 of 71) 3.2.1.21 - Beta-glucosidase / Gentobiase Genomic Order:  183
Name:  ? Brara.D00183 Secondary Identifier:  ? PAC:30620257
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5176 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7089 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7091 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7092 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00183 0.5kb upstream 0.5kb upstream 4104 true A04: 1238192-1242295 Brassica rapa FPsc
Brara.D00183 0.5kb upstream 0.5kb upstream 500 false A04: 1241796-1242295 Brassica rapa FPsc
Brara.D00183 0.5kb downstream 0.5kb downstream 4104 true A04: 1237692-1241795 Brassica rapa FPsc
Brara.D00183 0.5kb downstream 0.5kb downstream 500 false A04: 1237692-1238191 Brassica rapa FPsc
Brara.D00183 1.0kb upstream 1.0kb upstream 4604 true A04: 1238192-1242795 Brassica rapa FPsc
Brara.D00183 1.0kb upstream 1.0kb upstream 1000 false A04: 1241796-1242795 Brassica rapa FPsc
Brara.D00183 1.0kb downstream 1.0kb downstream 4604 true A04: 1237192-1241795 Brassica rapa FPsc
Brara.D00183 1.0kb downstream 1.0kb downstream 1000 false A04: 1237192-1238191 Brassica rapa FPsc
Brara.D00183 2.0kb upstream 2.0kb upstream 5604 true A04: 1238192-1243795 Brassica rapa FPsc
Brara.D00183 2.0kb upstream 2.0kb upstream 2000 false A04: 1241796-1243795 Brassica rapa FPsc
Brara.D00183 2.0kb downstream 2.0kb downstream 5604 true A04: 1236192-1241795 Brassica rapa FPsc
Brara.D00183 2.0kb downstream 2.0kb downstream 2000 false A04: 1236192-1238191 Brassica rapa FPsc
Brara.D00183 5.0kb upstream 5.0kb upstream 8604 true A04: 1238192-1246795 Brassica rapa FPsc
Brara.D00183 5.0kb upstream 5.0kb upstream 5000 false A04: 1241796-1246795 Brassica rapa FPsc
Brara.D00183 5.0kb downstream 5.0kb downstream 8604 true A04: 1233192-1241795 Brassica rapa FPsc
Brara.D00183 5.0kb downstream 5.0kb downstream 5000 false A04: 1233192-1238191 Brassica rapa FPsc
Brara.D00183 10.0kb upstream 10.0kb upstream 13604 true A04: 1238192-1251795 Brassica rapa FPsc
Brara.D00183 10.0kb upstream 10.0kb upstream 10000 false A04: 1241796-1251795 Brassica rapa FPsc
Brara.D00183 10.0kb downstream 10.0kb downstream 13604 true A04: 1228192-1241795 Brassica rapa FPsc
Brara.D00183 10.0kb downstream 10.0kb downstream 10000 false A04: 1228192-1238191 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122348308 5261 Brassicaceae Singleton cluster - no MSA
123840541 5264 Brassicales-Malvales View MSA
124350500 5266 SBM View MSA
124252389 5268 Malvidae View MSA
124071856 5270 Rosid View MSA
123753517 5271 Pentapetalae View MSA
122797747 5272 Eudicot View MSA
122051599 5273 Angiosperm View MSA
121350182 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier