Gene : Brara.D00201 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR10314:SF110 - CYSTEINE SYNTHASE Genomic Order:  201
Name:  ? Brara.D00201 Secondary Identifier:  ? PAC:30621533
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc CYSTSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6936 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00201 0.5kb upstream 0.5kb upstream 3725 true A04: 1365993-1369717 Brassica rapa FPsc
Brara.D00201 0.5kb upstream 0.5kb upstream 500 false A04: 1365993-1366492 Brassica rapa FPsc
Brara.D00201 0.5kb downstream 0.5kb downstream 3725 true A04: 1366493-1370217 Brassica rapa FPsc
Brara.D00201 0.5kb downstream 0.5kb downstream 500 false A04: 1369718-1370217 Brassica rapa FPsc
Brara.D00201 1.0kb upstream 1.0kb upstream 4225 true A04: 1365493-1369717 Brassica rapa FPsc
Brara.D00201 1.0kb upstream 1.0kb upstream 1000 false A04: 1365493-1366492 Brassica rapa FPsc
Brara.D00201 1.0kb downstream 1.0kb downstream 4225 true A04: 1366493-1370717 Brassica rapa FPsc
Brara.D00201 1.0kb downstream 1.0kb downstream 1000 false A04: 1369718-1370717 Brassica rapa FPsc
Brara.D00201 2.0kb upstream 2.0kb upstream 5225 true A04: 1364493-1369717 Brassica rapa FPsc
Brara.D00201 2.0kb upstream 2.0kb upstream 2000 false A04: 1364493-1366492 Brassica rapa FPsc
Brara.D00201 2.0kb downstream 2.0kb downstream 5225 true A04: 1366493-1371717 Brassica rapa FPsc
Brara.D00201 2.0kb downstream 2.0kb downstream 2000 false A04: 1369718-1371717 Brassica rapa FPsc
Brara.D00201 5.0kb upstream 5.0kb upstream 8225 true A04: 1361493-1369717 Brassica rapa FPsc
Brara.D00201 5.0kb upstream 5.0kb upstream 5000 false A04: 1361493-1366492 Brassica rapa FPsc
Brara.D00201 5.0kb downstream 5.0kb downstream 8225 true A04: 1366493-1374717 Brassica rapa FPsc
Brara.D00201 5.0kb downstream 5.0kb downstream 5000 false A04: 1369718-1374717 Brassica rapa FPsc
Brara.D00201 10.0kb upstream 10.0kb upstream 13225 true A04: 1356493-1369717 Brassica rapa FPsc
Brara.D00201 10.0kb upstream 10.0kb upstream 10000 false A04: 1356493-1366492 Brassica rapa FPsc
Brara.D00201 10.0kb downstream 10.0kb downstream 13225 true A04: 1366493-1379717 Brassica rapa FPsc
Brara.D00201 10.0kb downstream 10.0kb downstream 10000 false A04: 1369718-1379717 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360538 5261 Brassicaceae View MSA
123838792 5264 Brassicales-Malvales View MSA
124340029 5266 SBM View MSA
124241185 5268 Malvidae View MSA
124068226 5270 Rosid View MSA
123737517 5271 Pentapetalae View MSA
122787269 5272 Eudicot View MSA
122042312 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier