Gene : Brara.F01108 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR10366//PTHR10366:SF404 - NAD DEPENDENT EPIMERASE/DEHYDRATASE Genomic Order:  1108
Name:  ? Brara.F01108 Secondary Identifier:  ? PAC:30630954
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-361 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F01108 0.5kb upstream 0.5kb upstream 3845 true A06: 6234529-6238373 Brassica rapa FPsc
Brara.F01108 0.5kb upstream 0.5kb upstream 500 false A06: 6234529-6235028 Brassica rapa FPsc
Brara.F01108 0.5kb downstream 0.5kb downstream 3845 true A06: 6235029-6238873 Brassica rapa FPsc
Brara.F01108 0.5kb downstream 0.5kb downstream 500 false A06: 6238374-6238873 Brassica rapa FPsc
Brara.F01108 1.0kb upstream 1.0kb upstream 4345 true A06: 6234029-6238373 Brassica rapa FPsc
Brara.F01108 1.0kb upstream 1.0kb upstream 1000 false A06: 6234029-6235028 Brassica rapa FPsc
Brara.F01108 1.0kb downstream 1.0kb downstream 4345 true A06: 6235029-6239373 Brassica rapa FPsc
Brara.F01108 1.0kb downstream 1.0kb downstream 1000 false A06: 6238374-6239373 Brassica rapa FPsc
Brara.F01108 2.0kb upstream 2.0kb upstream 5345 true A06: 6233029-6238373 Brassica rapa FPsc
Brara.F01108 2.0kb upstream 2.0kb upstream 2000 false A06: 6233029-6235028 Brassica rapa FPsc
Brara.F01108 2.0kb downstream 2.0kb downstream 5345 true A06: 6235029-6240373 Brassica rapa FPsc
Brara.F01108 2.0kb downstream 2.0kb downstream 2000 false A06: 6238374-6240373 Brassica rapa FPsc
Brara.F01108 5.0kb upstream 5.0kb upstream 8345 true A06: 6230029-6238373 Brassica rapa FPsc
Brara.F01108 5.0kb upstream 5.0kb upstream 5000 false A06: 6230029-6235028 Brassica rapa FPsc
Brara.F01108 5.0kb downstream 5.0kb downstream 8345 true A06: 6235029-6243373 Brassica rapa FPsc
Brara.F01108 5.0kb downstream 5.0kb downstream 5000 false A06: 6238374-6243373 Brassica rapa FPsc
Brara.F01108 10.0kb upstream 10.0kb upstream 13345 true A06: 6225029-6238373 Brassica rapa FPsc
Brara.F01108 10.0kb upstream 10.0kb upstream 10000 false A06: 6225029-6235028 Brassica rapa FPsc
Brara.F01108 10.0kb downstream 10.0kb downstream 13345 true A06: 6235029-6248373 Brassica rapa FPsc
Brara.F01108 10.0kb downstream 10.0kb downstream 10000 false A06: 6238374-6248373 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041043 5273 Angiosperm View MSA
122380734 5261 Brassicaceae View MSA
123829409 5264 Brassicales-Malvales View MSA
124344604 5266 SBM View MSA
124243551 5268 Malvidae View MSA
124063767 5270 Rosid View MSA
123748181 5271 Pentapetalae View MSA
122792644 5272 Eudicot View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier