Gene : Brara.F02121 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR31080:SF19 - PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN Genomic Order:  2121
Name:  ? Brara.F02121 Secondary Identifier:  ? PAC:30630630
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1081 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F02121 0.5kb upstream 0.5kb upstream 1279 true A06: 17920551-17921829 Brassica rapa FPsc
Brara.F02121 0.5kb upstream 0.5kb upstream 500 false A06: 17921330-17921829 Brassica rapa FPsc
Brara.F02121 0.5kb downstream 0.5kb downstream 1279 true A06: 17920051-17921329 Brassica rapa FPsc
Brara.F02121 0.5kb downstream 0.5kb downstream 500 false A06: 17920051-17920550 Brassica rapa FPsc
Brara.F02121 1.0kb upstream 1.0kb upstream 1779 true A06: 17920551-17922329 Brassica rapa FPsc
Brara.F02121 1.0kb upstream 1.0kb upstream 1000 false A06: 17921330-17922329 Brassica rapa FPsc
Brara.F02121 1.0kb downstream 1.0kb downstream 1779 true A06: 17919551-17921329 Brassica rapa FPsc
Brara.F02121 1.0kb downstream 1.0kb downstream 1000 false A06: 17919551-17920550 Brassica rapa FPsc
Brara.F02121 2.0kb upstream 2.0kb upstream 2779 true A06: 17920551-17923329 Brassica rapa FPsc
Brara.F02121 2.0kb upstream 2.0kb upstream 2000 false A06: 17921330-17923329 Brassica rapa FPsc
Brara.F02121 2.0kb downstream 2.0kb downstream 2779 true A06: 17918551-17921329 Brassica rapa FPsc
Brara.F02121 2.0kb downstream 2.0kb downstream 2000 false A06: 17918551-17920550 Brassica rapa FPsc
Brara.F02121 5.0kb upstream 5.0kb upstream 5779 true A06: 17920551-17926329 Brassica rapa FPsc
Brara.F02121 5.0kb upstream 5.0kb upstream 5000 false A06: 17921330-17926329 Brassica rapa FPsc
Brara.F02121 5.0kb downstream 5.0kb downstream 5779 true A06: 17915551-17921329 Brassica rapa FPsc
Brara.F02121 5.0kb downstream 5.0kb downstream 5000 false A06: 17915551-17920550 Brassica rapa FPsc
Brara.F02121 10.0kb upstream 10.0kb upstream 10779 true A06: 17920551-17931329 Brassica rapa FPsc
Brara.F02121 10.0kb upstream 10.0kb upstream 10000 false A06: 17921330-17931329 Brassica rapa FPsc
Brara.F02121 10.0kb downstream 10.0kb downstream 10779 true A06: 17910551-17921329 Brassica rapa FPsc
Brara.F02121 10.0kb downstream 10.0kb downstream 10000 false A06: 17910551-17920550 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376892 5261 Brassicaceae View MSA
123829833 5264 Brassicales-Malvales View MSA
124349206 5266 SBM View MSA
124242648 5268 Malvidae View MSA
124061401 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier