Gene : Brara.F03578 B. rapa FPsc v1.3
Defline:  (1 of 8) PTHR31517:SF11 - PEROXIDASE 31-RELATED Genomic Order:  3578
Name:  ? Brara.F03578 Secondary Identifier:  ? PAC:30628614
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5466 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7214 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7445 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F03578 0.5kb upstream 0.5kb upstream 1779 true A06: 27516088-27517866 Brassica rapa FPsc
Brara.F03578 0.5kb upstream 0.5kb upstream 500 false A06: 27516088-27516587 Brassica rapa FPsc
Brara.F03578 0.5kb downstream 0.5kb downstream 1779 true A06: 27516588-27518366 Brassica rapa FPsc
Brara.F03578 0.5kb downstream 0.5kb downstream 500 false A06: 27517867-27518366 Brassica rapa FPsc
Brara.F03578 1.0kb upstream 1.0kb upstream 2279 true A06: 27515588-27517866 Brassica rapa FPsc
Brara.F03578 1.0kb upstream 1.0kb upstream 1000 false A06: 27515588-27516587 Brassica rapa FPsc
Brara.F03578 1.0kb downstream 1.0kb downstream 2279 true A06: 27516588-27518866 Brassica rapa FPsc
Brara.F03578 1.0kb downstream 1.0kb downstream 1000 false A06: 27517867-27518866 Brassica rapa FPsc
Brara.F03578 2.0kb upstream 2.0kb upstream 3279 true A06: 27514588-27517866 Brassica rapa FPsc
Brara.F03578 2.0kb upstream 2.0kb upstream 2000 false A06: 27514588-27516587 Brassica rapa FPsc
Brara.F03578 2.0kb downstream 2.0kb downstream 3279 true A06: 27516588-27519866 Brassica rapa FPsc
Brara.F03578 2.0kb downstream 2.0kb downstream 2000 false A06: 27517867-27519866 Brassica rapa FPsc
Brara.F03578 5.0kb upstream 5.0kb upstream 6279 true A06: 27511588-27517866 Brassica rapa FPsc
Brara.F03578 5.0kb upstream 5.0kb upstream 5000 false A06: 27511588-27516587 Brassica rapa FPsc
Brara.F03578 5.0kb downstream 5.0kb downstream 6279 true A06: 27516588-27522866 Brassica rapa FPsc
Brara.F03578 5.0kb downstream 5.0kb downstream 5000 false A06: 27517867-27522866 Brassica rapa FPsc
Brara.F03578 10.0kb upstream 10.0kb upstream 11279 true A06: 27506588-27517866 Brassica rapa FPsc
Brara.F03578 10.0kb upstream 10.0kb upstream 10000 false A06: 27506588-27516587 Brassica rapa FPsc
Brara.F03578 10.0kb downstream 10.0kb downstream 11279 true A06: 27516588-27527866 Brassica rapa FPsc
Brara.F03578 10.0kb downstream 10.0kb downstream 10000 false A06: 27517867-27527866 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365146 5261 Brassicaceae View MSA
123839125 5264 Brassicales-Malvales View MSA
124339069 5266 SBM View MSA
124243658 5268 Malvidae View MSA
124069813 5270 Rosid View MSA
123741716 5271 Pentapetalae View MSA
122795989 5272 Eudicot View MSA
122048017 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier