Gene : Brara.G00278 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR20861:SF1 - HOMOSERINE KINASE Genomic Order:  278
Name:  ? Brara.G00278 Secondary Identifier:  ? PAC:30634805
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc HOMOSER-THRESYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3001 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-702 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-724 Brassica rapa FPsc pathologic  
BrapaFPsc THRESYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G00278 0.5kb upstream 0.5kb upstream 1982 true A07: 2589332-2591313 Brassica rapa FPsc
Brara.G00278 0.5kb upstream 0.5kb upstream 500 false A07: 2590814-2591313 Brassica rapa FPsc
Brara.G00278 0.5kb downstream 0.5kb downstream 1982 true A07: 2588832-2590813 Brassica rapa FPsc
Brara.G00278 0.5kb downstream 0.5kb downstream 500 false A07: 2588832-2589331 Brassica rapa FPsc
Brara.G00278 1.0kb upstream 1.0kb upstream 2482 true A07: 2589332-2591813 Brassica rapa FPsc
Brara.G00278 1.0kb upstream 1.0kb upstream 1000 false A07: 2590814-2591813 Brassica rapa FPsc
Brara.G00278 1.0kb downstream 1.0kb downstream 2482 true A07: 2588332-2590813 Brassica rapa FPsc
Brara.G00278 1.0kb downstream 1.0kb downstream 1000 false A07: 2588332-2589331 Brassica rapa FPsc
Brara.G00278 2.0kb upstream 2.0kb upstream 3482 true A07: 2589332-2592813 Brassica rapa FPsc
Brara.G00278 2.0kb upstream 2.0kb upstream 2000 false A07: 2590814-2592813 Brassica rapa FPsc
Brara.G00278 2.0kb downstream 2.0kb downstream 3482 true A07: 2587332-2590813 Brassica rapa FPsc
Brara.G00278 2.0kb downstream 2.0kb downstream 2000 false A07: 2587332-2589331 Brassica rapa FPsc
Brara.G00278 5.0kb upstream 5.0kb upstream 6482 true A07: 2589332-2595813 Brassica rapa FPsc
Brara.G00278 5.0kb upstream 5.0kb upstream 5000 false A07: 2590814-2595813 Brassica rapa FPsc
Brara.G00278 5.0kb downstream 5.0kb downstream 6482 true A07: 2584332-2590813 Brassica rapa FPsc
Brara.G00278 5.0kb downstream 5.0kb downstream 5000 false A07: 2584332-2589331 Brassica rapa FPsc
Brara.G00278 10.0kb upstream 10.0kb upstream 11482 true A07: 2589332-2600813 Brassica rapa FPsc
Brara.G00278 10.0kb upstream 10.0kb upstream 10000 false A07: 2590814-2600813 Brassica rapa FPsc
Brara.G00278 10.0kb downstream 10.0kb downstream 11482 true A07: 2579332-2590813 Brassica rapa FPsc
Brara.G00278 10.0kb downstream 10.0kb downstream 10000 false A07: 2579332-2589331 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361843 5261 Brassicaceae View MSA
123832058 5264 Brassicales-Malvales View MSA
124343868 5266 SBM View MSA
124249755 5268 Malvidae View MSA
124063769 5270 Rosid View MSA
123740380 5271 Pentapetalae View MSA
122792807 5272 Eudicot View MSA
122044756 5273 Angiosperm View MSA
121343956 5274 Embryophyte View MSA
123424273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier