Gene : Brara.G00900 B. rapa FPsc v1.3
Defline:  (1 of 279) PF00847 - AP2 domain (AP2) Genomic Order:  900
Name:  ? Brara.G00900 Secondary Identifier:  ? PAC:30632076
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G00900 0.5kb upstream 0.5kb upstream 1388 true A07: 10748389-10749776 Brassica rapa FPsc
Brara.G00900 0.5kb upstream 0.5kb upstream 500 false A07: 10748389-10748888 Brassica rapa FPsc
Brara.G00900 0.5kb downstream 0.5kb downstream 1388 true A07: 10748889-10750276 Brassica rapa FPsc
Brara.G00900 0.5kb downstream 0.5kb downstream 500 false A07: 10749777-10750276 Brassica rapa FPsc
Brara.G00900 1.0kb upstream 1.0kb upstream 1888 true A07: 10747889-10749776 Brassica rapa FPsc
Brara.G00900 1.0kb upstream 1.0kb upstream 1000 false A07: 10747889-10748888 Brassica rapa FPsc
Brara.G00900 1.0kb downstream 1.0kb downstream 1888 true A07: 10748889-10750776 Brassica rapa FPsc
Brara.G00900 1.0kb downstream 1.0kb downstream 1000 false A07: 10749777-10750776 Brassica rapa FPsc
Brara.G00900 2.0kb upstream 2.0kb upstream 2888 true A07: 10746889-10749776 Brassica rapa FPsc
Brara.G00900 2.0kb upstream 2.0kb upstream 2000 false A07: 10746889-10748888 Brassica rapa FPsc
Brara.G00900 2.0kb downstream 2.0kb downstream 2888 true A07: 10748889-10751776 Brassica rapa FPsc
Brara.G00900 2.0kb downstream 2.0kb downstream 2000 false A07: 10749777-10751776 Brassica rapa FPsc
Brara.G00900 5.0kb upstream 5.0kb upstream 5888 true A07: 10743889-10749776 Brassica rapa FPsc
Brara.G00900 5.0kb upstream 5.0kb upstream 5000 false A07: 10743889-10748888 Brassica rapa FPsc
Brara.G00900 5.0kb downstream 5.0kb downstream 5888 true A07: 10748889-10754776 Brassica rapa FPsc
Brara.G00900 5.0kb downstream 5.0kb downstream 5000 false A07: 10749777-10754776 Brassica rapa FPsc
Brara.G00900 10.0kb upstream 10.0kb upstream 10888 true A07: 10738889-10749776 Brassica rapa FPsc
Brara.G00900 10.0kb upstream 10.0kb upstream 10000 false A07: 10738889-10748888 Brassica rapa FPsc
Brara.G00900 10.0kb downstream 10.0kb downstream 10888 true A07: 10748889-10759776 Brassica rapa FPsc
Brara.G00900 10.0kb downstream 10.0kb downstream 10000 false A07: 10749777-10759776 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122351087 5261 Brassicaceae Singleton cluster - no MSA
123790021 5264 Brassicales-Malvales Singleton cluster - no MSA
124287996 5266 SBM Singleton cluster - no MSA
124141592 5268 Malvidae Singleton cluster - no MSA
123868625 5270 Rosid Singleton cluster - no MSA
123453314 5271 Pentapetalae Singleton cluster - no MSA
122488779 5272 Eudicot Singleton cluster - no MSA
122048706 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier