Gene : Brara.H00147 B. rapa FPsc v1.3
Defline:  (1 of 279) PF00847 - AP2 domain (AP2) Genomic Order:  147
Name:  ? Brara.H00147 Secondary Identifier:  ? PAC:30647793
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H00147 0.5kb upstream 0.5kb upstream 1405 true A08: 1244688-1246092 Brassica rapa FPsc
Brara.H00147 0.5kb upstream 0.5kb upstream 500 false A08: 1244688-1245187 Brassica rapa FPsc
Brara.H00147 0.5kb downstream 0.5kb downstream 1405 true A08: 1245188-1246592 Brassica rapa FPsc
Brara.H00147 0.5kb downstream 0.5kb downstream 500 false A08: 1246093-1246592 Brassica rapa FPsc
Brara.H00147 1.0kb upstream 1.0kb upstream 1905 true A08: 1244188-1246092 Brassica rapa FPsc
Brara.H00147 1.0kb upstream 1.0kb upstream 1000 false A08: 1244188-1245187 Brassica rapa FPsc
Brara.H00147 1.0kb downstream 1.0kb downstream 1905 true A08: 1245188-1247092 Brassica rapa FPsc
Brara.H00147 1.0kb downstream 1.0kb downstream 1000 false A08: 1246093-1247092 Brassica rapa FPsc
Brara.H00147 2.0kb upstream 2.0kb upstream 2905 true A08: 1243188-1246092 Brassica rapa FPsc
Brara.H00147 2.0kb upstream 2.0kb upstream 2000 false A08: 1243188-1245187 Brassica rapa FPsc
Brara.H00147 2.0kb downstream 2.0kb downstream 2905 true A08: 1245188-1248092 Brassica rapa FPsc
Brara.H00147 2.0kb downstream 2.0kb downstream 2000 false A08: 1246093-1248092 Brassica rapa FPsc
Brara.H00147 5.0kb upstream 5.0kb upstream 5905 true A08: 1240188-1246092 Brassica rapa FPsc
Brara.H00147 5.0kb upstream 5.0kb upstream 5000 false A08: 1240188-1245187 Brassica rapa FPsc
Brara.H00147 5.0kb downstream 5.0kb downstream 5905 true A08: 1245188-1251092 Brassica rapa FPsc
Brara.H00147 5.0kb downstream 5.0kb downstream 5000 false A08: 1246093-1251092 Brassica rapa FPsc
Brara.H00147 10.0kb upstream 10.0kb upstream 10905 true A08: 1235188-1246092 Brassica rapa FPsc
Brara.H00147 10.0kb upstream 10.0kb upstream 10000 false A08: 1235188-1245187 Brassica rapa FPsc
Brara.H00147 10.0kb downstream 10.0kb downstream 10905 true A08: 1245188-1256092 Brassica rapa FPsc
Brara.H00147 10.0kb downstream 10.0kb downstream 10000 false A08: 1246093-1256092 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367871 5261 Brassicaceae View MSA
123837956 5264 Brassicales-Malvales View MSA
124342412 5266 SBM View MSA
124252635 5268 Malvidae View MSA
124071408 5270 Rosid View MSA
123744061 5271 Pentapetalae View MSA
122791719 5272 Eudicot View MSA
122049614 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier