Gene : Brara.H02001 B. rapa FPsc v1.3
Defline:  (1 of 63) PF05678 - VQ motif (VQ) Genomic Order:  2001
Name:  ? Brara.H02001 Secondary Identifier:  ? PAC:30647404
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02001 0.5kb upstream 0.5kb upstream 1439 true A08: 18297735-18299173 Brassica rapa FPsc
Brara.H02001 0.5kb upstream 0.5kb upstream 500 false A08: 18297735-18298234 Brassica rapa FPsc
Brara.H02001 0.5kb downstream 0.5kb downstream 1439 true A08: 18298235-18299673 Brassica rapa FPsc
Brara.H02001 0.5kb downstream 0.5kb downstream 500 false A08: 18299174-18299673 Brassica rapa FPsc
Brara.H02001 1.0kb upstream 1.0kb upstream 1939 true A08: 18297235-18299173 Brassica rapa FPsc
Brara.H02001 1.0kb upstream 1.0kb upstream 1000 false A08: 18297235-18298234 Brassica rapa FPsc
Brara.H02001 1.0kb downstream 1.0kb downstream 1939 true A08: 18298235-18300173 Brassica rapa FPsc
Brara.H02001 1.0kb downstream 1.0kb downstream 1000 false A08: 18299174-18300173 Brassica rapa FPsc
Brara.H02001 2.0kb upstream 2.0kb upstream 2939 true A08: 18296235-18299173 Brassica rapa FPsc
Brara.H02001 2.0kb upstream 2.0kb upstream 2000 false A08: 18296235-18298234 Brassica rapa FPsc
Brara.H02001 2.0kb downstream 2.0kb downstream 2939 true A08: 18298235-18301173 Brassica rapa FPsc
Brara.H02001 2.0kb downstream 2.0kb downstream 2000 false A08: 18299174-18301173 Brassica rapa FPsc
Brara.H02001 5.0kb upstream 5.0kb upstream 5939 true A08: 18293235-18299173 Brassica rapa FPsc
Brara.H02001 5.0kb upstream 5.0kb upstream 5000 false A08: 18293235-18298234 Brassica rapa FPsc
Brara.H02001 5.0kb downstream 5.0kb downstream 5939 true A08: 18298235-18304173 Brassica rapa FPsc
Brara.H02001 5.0kb downstream 5.0kb downstream 5000 false A08: 18299174-18304173 Brassica rapa FPsc
Brara.H02001 10.0kb upstream 10.0kb upstream 10939 true A08: 18288235-18299173 Brassica rapa FPsc
Brara.H02001 10.0kb upstream 10.0kb upstream 10000 false A08: 18288235-18298234 Brassica rapa FPsc
Brara.H02001 10.0kb downstream 10.0kb downstream 10939 true A08: 18298235-18309173 Brassica rapa FPsc
Brara.H02001 10.0kb downstream 10.0kb downstream 10000 false A08: 18299174-18309173 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122354912 5261 Brassicaceae Singleton cluster - no MSA
123793231 5264 Brassicales-Malvales Singleton cluster - no MSA
124291079 5266 SBM Singleton cluster - no MSA
124250727 5268 Malvidae View MSA
124073802 5270 Rosid View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier