Gene : Brara.H01642 B. rapa FPsc v1.3
Defline:  (1 of 2) 2.6.1.52 - Phosphoserine transaminase / PSAT Genomic Order:  1642
Name:  ? Brara.H01642 Secondary Identifier:  ? PAC:30647048
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc SER-GLYSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc SERSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H01642 0.5kb upstream 0.5kb upstream 1802 true A08: 16253328-16255129 Brassica rapa FPsc
Brara.H01642 0.5kb upstream 0.5kb upstream 500 false A08: 16254630-16255129 Brassica rapa FPsc
Brara.H01642 0.5kb downstream 0.5kb downstream 1802 true A08: 16252828-16254629 Brassica rapa FPsc
Brara.H01642 0.5kb downstream 0.5kb downstream 500 false A08: 16252828-16253327 Brassica rapa FPsc
Brara.H01642 1.0kb upstream 1.0kb upstream 2302 true A08: 16253328-16255629 Brassica rapa FPsc
Brara.H01642 1.0kb upstream 1.0kb upstream 1000 false A08: 16254630-16255629 Brassica rapa FPsc
Brara.H01642 1.0kb downstream 1.0kb downstream 2302 true A08: 16252328-16254629 Brassica rapa FPsc
Brara.H01642 1.0kb downstream 1.0kb downstream 1000 false A08: 16252328-16253327 Brassica rapa FPsc
Brara.H01642 2.0kb upstream 2.0kb upstream 3302 true A08: 16253328-16256629 Brassica rapa FPsc
Brara.H01642 2.0kb upstream 2.0kb upstream 2000 false A08: 16254630-16256629 Brassica rapa FPsc
Brara.H01642 2.0kb downstream 2.0kb downstream 3302 true A08: 16251328-16254629 Brassica rapa FPsc
Brara.H01642 2.0kb downstream 2.0kb downstream 2000 false A08: 16251328-16253327 Brassica rapa FPsc
Brara.H01642 5.0kb upstream 5.0kb upstream 6302 true A08: 16253328-16259629 Brassica rapa FPsc
Brara.H01642 5.0kb upstream 5.0kb upstream 5000 false A08: 16254630-16259629 Brassica rapa FPsc
Brara.H01642 5.0kb downstream 5.0kb downstream 6302 true A08: 16248328-16254629 Brassica rapa FPsc
Brara.H01642 5.0kb downstream 5.0kb downstream 5000 false A08: 16248328-16253327 Brassica rapa FPsc
Brara.H01642 10.0kb upstream 10.0kb upstream 11302 true A08: 16253328-16264629 Brassica rapa FPsc
Brara.H01642 10.0kb upstream 10.0kb upstream 10000 false A08: 16254630-16264629 Brassica rapa FPsc
Brara.H01642 10.0kb downstream 10.0kb downstream 11302 true A08: 16243328-16254629 Brassica rapa FPsc
Brara.H01642 10.0kb downstream 10.0kb downstream 10000 false A08: 16243328-16253327 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372397 5261 Brassicaceae View MSA
123837676 5264 Brassicales-Malvales View MSA
124340133 5266 SBM View MSA
124237926 5268 Malvidae View MSA
124074701 5270 Rosid View MSA
123739926 5271 Pentapetalae View MSA
122788097 5272 Eudicot View MSA
122043165 5273 Angiosperm View MSA
121346366 5274 Embryophyte View MSA
123424895 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier