Gene : Brara.H02546 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR32077:SF18 - FASCICLIN-LIKE ARABINOGALACTAN FAMILY PROTEIN Genomic Order:  2546
Name:  ? Brara.H02546 Secondary Identifier:  ? PAC:30647129
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02546 0.5kb upstream 0.5kb upstream 1235 true A08: 20875117-20876351 Brassica rapa FPsc
Brara.H02546 0.5kb upstream 0.5kb upstream 500 false A08: 20875852-20876351 Brassica rapa FPsc
Brara.H02546 0.5kb downstream 0.5kb downstream 1235 true A08: 20874617-20875851 Brassica rapa FPsc
Brara.H02546 0.5kb downstream 0.5kb downstream 500 false A08: 20874617-20875116 Brassica rapa FPsc
Brara.H02546 1.0kb upstream 1.0kb upstream 1735 true A08: 20875117-20876851 Brassica rapa FPsc
Brara.H02546 1.0kb upstream 1.0kb upstream 1000 false A08: 20875852-20876851 Brassica rapa FPsc
Brara.H02546 1.0kb downstream 1.0kb downstream 1735 true A08: 20874117-20875851 Brassica rapa FPsc
Brara.H02546 1.0kb downstream 1.0kb downstream 1000 false A08: 20874117-20875116 Brassica rapa FPsc
Brara.H02546 2.0kb upstream 2.0kb upstream 2735 true A08: 20875117-20877851 Brassica rapa FPsc
Brara.H02546 2.0kb upstream 2.0kb upstream 2000 false A08: 20875852-20877851 Brassica rapa FPsc
Brara.H02546 2.0kb downstream 2.0kb downstream 2735 true A08: 20873117-20875851 Brassica rapa FPsc
Brara.H02546 2.0kb downstream 2.0kb downstream 2000 false A08: 20873117-20875116 Brassica rapa FPsc
Brara.H02546 5.0kb upstream 5.0kb upstream 5735 true A08: 20875117-20880851 Brassica rapa FPsc
Brara.H02546 5.0kb upstream 5.0kb upstream 5000 false A08: 20875852-20880851 Brassica rapa FPsc
Brara.H02546 5.0kb downstream 5.0kb downstream 5735 true A08: 20870117-20875851 Brassica rapa FPsc
Brara.H02546 5.0kb downstream 5.0kb downstream 5000 false A08: 20870117-20875116 Brassica rapa FPsc
Brara.H02546 10.0kb upstream 10.0kb upstream 10735 true A08: 20875117-20885851 Brassica rapa FPsc
Brara.H02546 10.0kb upstream 10.0kb upstream 10000 false A08: 20875852-20885851 Brassica rapa FPsc
Brara.H02546 10.0kb downstream 10.0kb downstream 10735 true A08: 20865117-20875851 Brassica rapa FPsc
Brara.H02546 10.0kb downstream 10.0kb downstream 10000 false A08: 20865117-20875116 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122354835 5261 Brassicaceae Singleton cluster - no MSA
123793166 5264 Brassicales-Malvales Singleton cluster - no MSA
124291016 5266 SBM Singleton cluster - no MSA
124144043 5268 Malvidae Singleton cluster - no MSA
124038918 5270 Rosid View MSA
123753187 5271 Pentapetalae View MSA
122794600 5272 Eudicot View MSA
122049688 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier