Gene : Brara.I01118 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR10314:SF125 - THREONINE SYNTHASE 2, CHLOROPLASTIC Genomic Order:  1118
Name:  ? Brara.I01118 Secondary Identifier:  ? PAC:30644996
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc HOMOSER-THRESYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3001 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-724 Brassica rapa FPsc pathologic  
BrapaFPsc THRESYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I01118 0.5kb upstream 0.5kb upstream 2225 true A09: 6579222-6581446 Brassica rapa FPsc
Brara.I01118 0.5kb upstream 0.5kb upstream 500 false A09: 6579222-6579721 Brassica rapa FPsc
Brara.I01118 0.5kb downstream 0.5kb downstream 2225 true A09: 6579722-6581946 Brassica rapa FPsc
Brara.I01118 0.5kb downstream 0.5kb downstream 500 false A09: 6581447-6581946 Brassica rapa FPsc
Brara.I01118 1.0kb upstream 1.0kb upstream 2725 true A09: 6578722-6581446 Brassica rapa FPsc
Brara.I01118 1.0kb upstream 1.0kb upstream 1000 false A09: 6578722-6579721 Brassica rapa FPsc
Brara.I01118 1.0kb downstream 1.0kb downstream 2725 true A09: 6579722-6582446 Brassica rapa FPsc
Brara.I01118 1.0kb downstream 1.0kb downstream 1000 false A09: 6581447-6582446 Brassica rapa FPsc
Brara.I01118 2.0kb upstream 2.0kb upstream 3725 true A09: 6577722-6581446 Brassica rapa FPsc
Brara.I01118 2.0kb upstream 2.0kb upstream 2000 false A09: 6577722-6579721 Brassica rapa FPsc
Brara.I01118 2.0kb downstream 2.0kb downstream 3725 true A09: 6579722-6583446 Brassica rapa FPsc
Brara.I01118 2.0kb downstream 2.0kb downstream 2000 false A09: 6581447-6583446 Brassica rapa FPsc
Brara.I01118 5.0kb upstream 5.0kb upstream 6725 true A09: 6574722-6581446 Brassica rapa FPsc
Brara.I01118 5.0kb upstream 5.0kb upstream 5000 false A09: 6574722-6579721 Brassica rapa FPsc
Brara.I01118 5.0kb downstream 5.0kb downstream 6725 true A09: 6579722-6586446 Brassica rapa FPsc
Brara.I01118 5.0kb downstream 5.0kb downstream 5000 false A09: 6581447-6586446 Brassica rapa FPsc
Brara.I01118 10.0kb upstream 10.0kb upstream 11725 true A09: 6569722-6581446 Brassica rapa FPsc
Brara.I01118 10.0kb upstream 10.0kb upstream 10000 false A09: 6569722-6579721 Brassica rapa FPsc
Brara.I01118 10.0kb downstream 10.0kb downstream 11725 true A09: 6579722-6591446 Brassica rapa FPsc
Brara.I01118 10.0kb downstream 10.0kb downstream 10000 false A09: 6581447-6591446 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041159 5273 Angiosperm View MSA
122382006 5261 Brassicaceae View MSA
123803597 5264 Brassicales-Malvales View MSA
124300693 5266 SBM View MSA
124251759 5268 Malvidae View MSA
124069376 5270 Rosid View MSA
123748441 5271 Pentapetalae View MSA
122786729 5272 Eudicot View MSA
121349368 5274 Embryophyte View MSA
123424940 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier