Gene : Brara.I01684 B. rapa FPsc v1.3
Defline:  (1 of 38) PF04398 - Protein of unknown function, DUF538 (DUF538) Genomic Order:  1684
Name:  ? Brara.I01684 Secondary Identifier:  ? PAC:30645323
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I01684 0.5kb upstream 0.5kb upstream 1131 true A09: 11468068-11469198 Brassica rapa FPsc
Brara.I01684 0.5kb upstream 0.5kb upstream 500 false A09: 11468068-11468567 Brassica rapa FPsc
Brara.I01684 0.5kb downstream 0.5kb downstream 1131 true A09: 11468568-11469698 Brassica rapa FPsc
Brara.I01684 0.5kb downstream 0.5kb downstream 500 false A09: 11469199-11469698 Brassica rapa FPsc
Brara.I01684 1.0kb upstream 1.0kb upstream 1631 true A09: 11467568-11469198 Brassica rapa FPsc
Brara.I01684 1.0kb upstream 1.0kb upstream 1000 false A09: 11467568-11468567 Brassica rapa FPsc
Brara.I01684 1.0kb downstream 1.0kb downstream 1631 true A09: 11468568-11470198 Brassica rapa FPsc
Brara.I01684 1.0kb downstream 1.0kb downstream 1000 false A09: 11469199-11470198 Brassica rapa FPsc
Brara.I01684 2.0kb upstream 2.0kb upstream 2631 true A09: 11466568-11469198 Brassica rapa FPsc
Brara.I01684 2.0kb upstream 2.0kb upstream 2000 false A09: 11466568-11468567 Brassica rapa FPsc
Brara.I01684 2.0kb downstream 2.0kb downstream 2631 true A09: 11468568-11471198 Brassica rapa FPsc
Brara.I01684 2.0kb downstream 2.0kb downstream 2000 false A09: 11469199-11471198 Brassica rapa FPsc
Brara.I01684 5.0kb upstream 5.0kb upstream 5631 true A09: 11463568-11469198 Brassica rapa FPsc
Brara.I01684 5.0kb upstream 5.0kb upstream 5000 false A09: 11463568-11468567 Brassica rapa FPsc
Brara.I01684 5.0kb downstream 5.0kb downstream 5631 true A09: 11468568-11474198 Brassica rapa FPsc
Brara.I01684 5.0kb downstream 5.0kb downstream 5000 false A09: 11469199-11474198 Brassica rapa FPsc
Brara.I01684 10.0kb upstream 10.0kb upstream 10631 true A09: 11458568-11469198 Brassica rapa FPsc
Brara.I01684 10.0kb upstream 10.0kb upstream 10000 false A09: 11458568-11468567 Brassica rapa FPsc
Brara.I01684 10.0kb downstream 10.0kb downstream 10631 true A09: 11468568-11479198 Brassica rapa FPsc
Brara.I01684 10.0kb downstream 10.0kb downstream 10000 false A09: 11469199-11479198 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379974 5261 Brassicaceae View MSA
123839785 5264 Brassicales-Malvales View MSA
124338834 5266 SBM View MSA
124238463 5268 Malvidae View MSA
124067274 5270 Rosid View MSA
123752755 5271 Pentapetalae View MSA
122794473 5272 Eudicot View MSA
122046318 5273 Angiosperm View MSA
121348392 5274 Embryophyte View MSA
123380844 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier