Gene : Brara.I01430 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR31080:SF8 - F23N19.12 Genomic Order:  1430
Name:  ? Brara.I01430 Secondary Identifier:  ? PAC:30643246
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1081 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I01430 0.5kb upstream 0.5kb upstream 1278 true A09: 8927464-8928741 Brassica rapa FPsc
Brara.I01430 0.5kb upstream 0.5kb upstream 500 false A09: 8927464-8927963 Brassica rapa FPsc
Brara.I01430 0.5kb downstream 0.5kb downstream 1278 true A09: 8927964-8929241 Brassica rapa FPsc
Brara.I01430 0.5kb downstream 0.5kb downstream 500 false A09: 8928742-8929241 Brassica rapa FPsc
Brara.I01430 1.0kb upstream 1.0kb upstream 1778 true A09: 8926964-8928741 Brassica rapa FPsc
Brara.I01430 1.0kb upstream 1.0kb upstream 1000 false A09: 8926964-8927963 Brassica rapa FPsc
Brara.I01430 1.0kb downstream 1.0kb downstream 1778 true A09: 8927964-8929741 Brassica rapa FPsc
Brara.I01430 1.0kb downstream 1.0kb downstream 1000 false A09: 8928742-8929741 Brassica rapa FPsc
Brara.I01430 2.0kb upstream 2.0kb upstream 2778 true A09: 8925964-8928741 Brassica rapa FPsc
Brara.I01430 2.0kb upstream 2.0kb upstream 2000 false A09: 8925964-8927963 Brassica rapa FPsc
Brara.I01430 2.0kb downstream 2.0kb downstream 2778 true A09: 8927964-8930741 Brassica rapa FPsc
Brara.I01430 2.0kb downstream 2.0kb downstream 2000 false A09: 8928742-8930741 Brassica rapa FPsc
Brara.I01430 5.0kb upstream 5.0kb upstream 5778 true A09: 8922964-8928741 Brassica rapa FPsc
Brara.I01430 5.0kb upstream 5.0kb upstream 5000 false A09: 8922964-8927963 Brassica rapa FPsc
Brara.I01430 5.0kb downstream 5.0kb downstream 5778 true A09: 8927964-8933741 Brassica rapa FPsc
Brara.I01430 5.0kb downstream 5.0kb downstream 5000 false A09: 8928742-8933741 Brassica rapa FPsc
Brara.I01430 10.0kb upstream 10.0kb upstream 10778 true A09: 8917964-8928741 Brassica rapa FPsc
Brara.I01430 10.0kb upstream 10.0kb upstream 10000 false A09: 8917964-8927963 Brassica rapa FPsc
Brara.I01430 10.0kb downstream 10.0kb downstream 10778 true A09: 8927964-8938741 Brassica rapa FPsc
Brara.I01430 10.0kb downstream 10.0kb downstream 10000 false A09: 8928742-8938741 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122353859 5261 Brassicaceae Singleton cluster - no MSA
123792353 5264 Brassicales-Malvales Singleton cluster - no MSA
124290231 5266 SBM Singleton cluster - no MSA
124251133 5268 Malvidae View MSA
124072666 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier