Gene : Brara.I02585 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR27000:SF52 - LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN-RELATED Genomic Order:  2585
Name:  ? Brara.I02585 Secondary Identifier:  ? PAC:30642657
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1081 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I02585 0.5kb upstream 0.5kb upstream 1940 true A09: 24300003-24301942 Brassica rapa FPsc
Brara.I02585 0.5kb upstream 0.5kb upstream 500 false A09: 24301443-24301942 Brassica rapa FPsc
Brara.I02585 0.5kb downstream 0.5kb downstream 1940 true A09: 24299503-24301442 Brassica rapa FPsc
Brara.I02585 0.5kb downstream 0.5kb downstream 500 false A09: 24299503-24300002 Brassica rapa FPsc
Brara.I02585 1.0kb upstream 1.0kb upstream 2440 true A09: 24300003-24302442 Brassica rapa FPsc
Brara.I02585 1.0kb upstream 1.0kb upstream 1000 false A09: 24301443-24302442 Brassica rapa FPsc
Brara.I02585 1.0kb downstream 1.0kb downstream 2440 true A09: 24299003-24301442 Brassica rapa FPsc
Brara.I02585 1.0kb downstream 1.0kb downstream 1000 false A09: 24299003-24300002 Brassica rapa FPsc
Brara.I02585 2.0kb upstream 2.0kb upstream 3440 true A09: 24300003-24303442 Brassica rapa FPsc
Brara.I02585 2.0kb upstream 2.0kb upstream 2000 false A09: 24301443-24303442 Brassica rapa FPsc
Brara.I02585 2.0kb downstream 2.0kb downstream 3440 true A09: 24298003-24301442 Brassica rapa FPsc
Brara.I02585 2.0kb downstream 2.0kb downstream 2000 false A09: 24298003-24300002 Brassica rapa FPsc
Brara.I02585 5.0kb upstream 5.0kb upstream 6440 true A09: 24300003-24306442 Brassica rapa FPsc
Brara.I02585 5.0kb upstream 5.0kb upstream 5000 false A09: 24301443-24306442 Brassica rapa FPsc
Brara.I02585 5.0kb downstream 5.0kb downstream 6440 true A09: 24295003-24301442 Brassica rapa FPsc
Brara.I02585 5.0kb downstream 5.0kb downstream 5000 false A09: 24295003-24300002 Brassica rapa FPsc
Brara.I02585 10.0kb upstream 10.0kb upstream 11440 true A09: 24300003-24311442 Brassica rapa FPsc
Brara.I02585 10.0kb upstream 10.0kb upstream 10000 false A09: 24301443-24311442 Brassica rapa FPsc
Brara.I02585 10.0kb downstream 10.0kb downstream 11440 true A09: 24290003-24301442 Brassica rapa FPsc
Brara.I02585 10.0kb downstream 10.0kb downstream 10000 false A09: 24290003-24300002 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381289 5261 Brassicaceae View MSA
123831536 5264 Brassicales-Malvales View MSA
124336530 5266 SBM View MSA
124237636 5268 Malvidae View MSA
124071295 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier