Gene : Brara.I02273 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR22763:SF63 - C3HC4 TYPE ZINC-FINGER PROTEIN-RELATED Genomic Order:  2273
Name:  ? Brara.I02273 Secondary Identifier:  ? PAC:30645914
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I02273 0.5kb upstream 0.5kb upstream 1193 true A09: 17378199-17379391 Brassica rapa FPsc
Brara.I02273 0.5kb upstream 0.5kb upstream 500 false A09: 17378199-17378698 Brassica rapa FPsc
Brara.I02273 0.5kb downstream 0.5kb downstream 1193 true A09: 17378699-17379891 Brassica rapa FPsc
Brara.I02273 0.5kb downstream 0.5kb downstream 500 false A09: 17379392-17379891 Brassica rapa FPsc
Brara.I02273 1.0kb upstream 1.0kb upstream 1693 true A09: 17377699-17379391 Brassica rapa FPsc
Brara.I02273 1.0kb upstream 1.0kb upstream 1000 false A09: 17377699-17378698 Brassica rapa FPsc
Brara.I02273 1.0kb downstream 1.0kb downstream 1693 true A09: 17378699-17380391 Brassica rapa FPsc
Brara.I02273 1.0kb downstream 1.0kb downstream 1000 false A09: 17379392-17380391 Brassica rapa FPsc
Brara.I02273 2.0kb upstream 2.0kb upstream 2693 true A09: 17376699-17379391 Brassica rapa FPsc
Brara.I02273 2.0kb upstream 2.0kb upstream 2000 false A09: 17376699-17378698 Brassica rapa FPsc
Brara.I02273 2.0kb downstream 2.0kb downstream 2693 true A09: 17378699-17381391 Brassica rapa FPsc
Brara.I02273 2.0kb downstream 2.0kb downstream 2000 false A09: 17379392-17381391 Brassica rapa FPsc
Brara.I02273 5.0kb upstream 5.0kb upstream 5693 true A09: 17373699-17379391 Brassica rapa FPsc
Brara.I02273 5.0kb upstream 5.0kb upstream 5000 false A09: 17373699-17378698 Brassica rapa FPsc
Brara.I02273 5.0kb downstream 5.0kb downstream 5693 true A09: 17378699-17384391 Brassica rapa FPsc
Brara.I02273 5.0kb downstream 5.0kb downstream 5000 false A09: 17379392-17384391 Brassica rapa FPsc
Brara.I02273 10.0kb upstream 10.0kb upstream 10693 true A09: 17368699-17379391 Brassica rapa FPsc
Brara.I02273 10.0kb upstream 10.0kb upstream 10000 false A09: 17368699-17378698 Brassica rapa FPsc
Brara.I02273 10.0kb downstream 10.0kb downstream 10693 true A09: 17378699-17389391 Brassica rapa FPsc
Brara.I02273 10.0kb downstream 10.0kb downstream 10000 false A09: 17379392-17389391 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379665 5261 Brassicaceae View MSA
123802372 5264 Brassicales-Malvales View MSA
124346586 5266 SBM View MSA
124248129 5268 Malvidae View MSA
124074172 5270 Rosid View MSA
123753748 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier