Gene : Brara.I02720 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR31642:SF24 - HXXXD-TYPE ACYL-TRANSFERASE-LIKE PROTEIN Genomic Order:  2720
Name:  ? Brara.I02720 Secondary Identifier:  ? PAC:30642323
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-4203 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5835 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6801 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I02720 0.5kb upstream 0.5kb upstream 1823 true A09: 26028184-26030006 Brassica rapa FPsc
Brara.I02720 0.5kb upstream 0.5kb upstream 500 false A09: 26029507-26030006 Brassica rapa FPsc
Brara.I02720 0.5kb downstream 0.5kb downstream 1823 true A09: 26027684-26029506 Brassica rapa FPsc
Brara.I02720 0.5kb downstream 0.5kb downstream 500 false A09: 26027684-26028183 Brassica rapa FPsc
Brara.I02720 1.0kb upstream 1.0kb upstream 2323 true A09: 26028184-26030506 Brassica rapa FPsc
Brara.I02720 1.0kb upstream 1.0kb upstream 1000 false A09: 26029507-26030506 Brassica rapa FPsc
Brara.I02720 1.0kb downstream 1.0kb downstream 2323 true A09: 26027184-26029506 Brassica rapa FPsc
Brara.I02720 1.0kb downstream 1.0kb downstream 1000 false A09: 26027184-26028183 Brassica rapa FPsc
Brara.I02720 2.0kb upstream 2.0kb upstream 3323 true A09: 26028184-26031506 Brassica rapa FPsc
Brara.I02720 2.0kb upstream 2.0kb upstream 2000 false A09: 26029507-26031506 Brassica rapa FPsc
Brara.I02720 2.0kb downstream 2.0kb downstream 3323 true A09: 26026184-26029506 Brassica rapa FPsc
Brara.I02720 2.0kb downstream 2.0kb downstream 2000 false A09: 26026184-26028183 Brassica rapa FPsc
Brara.I02720 5.0kb upstream 5.0kb upstream 6323 true A09: 26028184-26034506 Brassica rapa FPsc
Brara.I02720 5.0kb upstream 5.0kb upstream 5000 false A09: 26029507-26034506 Brassica rapa FPsc
Brara.I02720 5.0kb downstream 5.0kb downstream 6323 true A09: 26023184-26029506 Brassica rapa FPsc
Brara.I02720 5.0kb downstream 5.0kb downstream 5000 false A09: 26023184-26028183 Brassica rapa FPsc
Brara.I02720 10.0kb upstream 10.0kb upstream 11323 true A09: 26028184-26039506 Brassica rapa FPsc
Brara.I02720 10.0kb upstream 10.0kb upstream 10000 false A09: 26029507-26039506 Brassica rapa FPsc
Brara.I02720 10.0kb downstream 10.0kb downstream 11323 true A09: 26018184-26029506 Brassica rapa FPsc
Brara.I02720 10.0kb downstream 10.0kb downstream 10000 false A09: 26018184-26028183 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369633 5261 Brassicaceae View MSA
123829524 5264 Brassicales-Malvales View MSA
124342757 5266 SBM View MSA
124242615 5268 Malvidae View MSA
124061522 5270 Rosid View MSA
123756556 5271 Pentapetalae View MSA
122797720 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier