Gene : Brara.I03975 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR23342 - N-ACETYLGLUTAMATE SYNTHASE Genomic Order:  3975
Name:  ? Brara.I03975 Secondary Identifier:  ? PAC:30641754
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ARGSYNBSUB-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ARGSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc GLUTORN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I03975 0.5kb upstream 0.5kb upstream 1532 true A09: 36103826-36105357 Brassica rapa FPsc
Brara.I03975 0.5kb upstream 0.5kb upstream 500 false A09: 36104858-36105357 Brassica rapa FPsc
Brara.I03975 0.5kb downstream 0.5kb downstream 1532 true A09: 36103326-36104857 Brassica rapa FPsc
Brara.I03975 0.5kb downstream 0.5kb downstream 500 false A09: 36103326-36103825 Brassica rapa FPsc
Brara.I03975 1.0kb upstream 1.0kb upstream 2032 true A09: 36103826-36105857 Brassica rapa FPsc
Brara.I03975 1.0kb upstream 1.0kb upstream 1000 false A09: 36104858-36105857 Brassica rapa FPsc
Brara.I03975 1.0kb downstream 1.0kb downstream 2032 true A09: 36102826-36104857 Brassica rapa FPsc
Brara.I03975 1.0kb downstream 1.0kb downstream 1000 false A09: 36102826-36103825 Brassica rapa FPsc
Brara.I03975 2.0kb upstream 2.0kb upstream 3032 true A09: 36103826-36106857 Brassica rapa FPsc
Brara.I03975 2.0kb upstream 2.0kb upstream 2000 false A09: 36104858-36106857 Brassica rapa FPsc
Brara.I03975 2.0kb downstream 2.0kb downstream 3032 true A09: 36101826-36104857 Brassica rapa FPsc
Brara.I03975 2.0kb downstream 2.0kb downstream 2000 false A09: 36101826-36103825 Brassica rapa FPsc
Brara.I03975 5.0kb upstream 5.0kb upstream 6032 true A09: 36103826-36109857 Brassica rapa FPsc
Brara.I03975 5.0kb upstream 5.0kb upstream 5000 false A09: 36104858-36109857 Brassica rapa FPsc
Brara.I03975 5.0kb downstream 5.0kb downstream 6032 true A09: 36098826-36104857 Brassica rapa FPsc
Brara.I03975 5.0kb downstream 5.0kb downstream 5000 false A09: 36098826-36103825 Brassica rapa FPsc
Brara.I03975 10.0kb upstream 10.0kb upstream 11032 true A09: 36103826-36114857 Brassica rapa FPsc
Brara.I03975 10.0kb upstream 10.0kb upstream 10000 false A09: 36104858-36114857 Brassica rapa FPsc
Brara.I03975 10.0kb downstream 10.0kb downstream 11032 true A09: 36093826-36104857 Brassica rapa FPsc
Brara.I03975 10.0kb downstream 10.0kb downstream 10000 false A09: 36093826-36103825 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368103 5261 Brassicaceae View MSA
123834748 5264 Brassicales-Malvales View MSA
124350403 5266 SBM View MSA
124250749 5268 Malvidae View MSA
124062864 5270 Rosid View MSA
123739875 5271 Pentapetalae View MSA
122792416 5272 Eudicot View MSA
122045485 5273 Angiosperm View MSA
121347525 5274 Embryophyte View MSA
123424020 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier