Gene : Brara.I04354 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR10168:SF118 - GLUTAREDOXIN-C11-RELATED Genomic Order:  4354
Name:  ? Brara.I04354 Secondary Identifier:  ? PAC:30641427
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc THIOREDOX-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I04354 0.5kb upstream 0.5kb upstream 1178 true A09: 38113416-38114593 Brassica rapa FPsc
Brara.I04354 0.5kb upstream 0.5kb upstream 500 false A09: 38113416-38113915 Brassica rapa FPsc
Brara.I04354 0.5kb downstream 0.5kb downstream 1178 true A09: 38113916-38115093 Brassica rapa FPsc
Brara.I04354 0.5kb downstream 0.5kb downstream 500 false A09: 38114594-38115093 Brassica rapa FPsc
Brara.I04354 1.0kb upstream 1.0kb upstream 1678 true A09: 38112916-38114593 Brassica rapa FPsc
Brara.I04354 1.0kb upstream 1.0kb upstream 1000 false A09: 38112916-38113915 Brassica rapa FPsc
Brara.I04354 1.0kb downstream 1.0kb downstream 1678 true A09: 38113916-38115593 Brassica rapa FPsc
Brara.I04354 1.0kb downstream 1.0kb downstream 1000 false A09: 38114594-38115593 Brassica rapa FPsc
Brara.I04354 2.0kb upstream 2.0kb upstream 2678 true A09: 38111916-38114593 Brassica rapa FPsc
Brara.I04354 2.0kb upstream 2.0kb upstream 2000 false A09: 38111916-38113915 Brassica rapa FPsc
Brara.I04354 2.0kb downstream 2.0kb downstream 2678 true A09: 38113916-38116593 Brassica rapa FPsc
Brara.I04354 2.0kb downstream 2.0kb downstream 2000 false A09: 38114594-38116593 Brassica rapa FPsc
Brara.I04354 5.0kb upstream 5.0kb upstream 5678 true A09: 38108916-38114593 Brassica rapa FPsc
Brara.I04354 5.0kb upstream 5.0kb upstream 5000 false A09: 38108916-38113915 Brassica rapa FPsc
Brara.I04354 5.0kb downstream 5.0kb downstream 5678 true A09: 38113916-38119593 Brassica rapa FPsc
Brara.I04354 5.0kb downstream 5.0kb downstream 5000 false A09: 38114594-38119593 Brassica rapa FPsc
Brara.I04354 10.0kb upstream 10.0kb upstream 10678 true A09: 38103916-38114593 Brassica rapa FPsc
Brara.I04354 10.0kb upstream 10.0kb upstream 10000 false A09: 38103916-38113915 Brassica rapa FPsc
Brara.I04354 10.0kb downstream 10.0kb downstream 10678 true A09: 38113916-38124593 Brassica rapa FPsc
Brara.I04354 10.0kb downstream 10.0kb downstream 10000 false A09: 38114594-38124593 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122353420 5261 Brassicaceae Singleton cluster - no MSA
123792005 5264 Brassicales-Malvales Singleton cluster - no MSA
124350155 5266 SBM View MSA
124244333 5268 Malvidae View MSA
124063697 5270 Rosid View MSA
123752852 5271 Pentapetalae View MSA
122796200 5272 Eudicot View MSA
122047042 5273 Angiosperm View MSA
121349593 5274 Embryophyte View MSA
123381368 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier