Gene : Brara.I05049 B. rapa FPsc v1.3
Defline:  (1 of 7) PTHR31140:SF3 - AP2/ERF AND B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR RAV2-RELATED Genomic Order:  5049
Name:  ? Brara.I05049 Secondary Identifier:  ? PAC:30641673
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I05049 0.5kb upstream 0.5kb upstream 1778 true A09: 41876281-41878058 Brassica rapa FPsc
Brara.I05049 0.5kb upstream 0.5kb upstream 500 false A09: 41876281-41876780 Brassica rapa FPsc
Brara.I05049 0.5kb downstream 0.5kb downstream 1778 true A09: 41876781-41878558 Brassica rapa FPsc
Brara.I05049 0.5kb downstream 0.5kb downstream 500 false A09: 41878059-41878558 Brassica rapa FPsc
Brara.I05049 1.0kb upstream 1.0kb upstream 2278 true A09: 41875781-41878058 Brassica rapa FPsc
Brara.I05049 1.0kb upstream 1.0kb upstream 1000 false A09: 41875781-41876780 Brassica rapa FPsc
Brara.I05049 1.0kb downstream 1.0kb downstream 2278 true A09: 41876781-41879058 Brassica rapa FPsc
Brara.I05049 1.0kb downstream 1.0kb downstream 1000 false A09: 41878059-41879058 Brassica rapa FPsc
Brara.I05049 2.0kb upstream 2.0kb upstream 3278 true A09: 41874781-41878058 Brassica rapa FPsc
Brara.I05049 2.0kb upstream 2.0kb upstream 2000 false A09: 41874781-41876780 Brassica rapa FPsc
Brara.I05049 2.0kb downstream 2.0kb downstream 3278 true A09: 41876781-41880058 Brassica rapa FPsc
Brara.I05049 2.0kb downstream 2.0kb downstream 2000 false A09: 41878059-41880058 Brassica rapa FPsc
Brara.I05049 5.0kb upstream 5.0kb upstream 6278 true A09: 41871781-41878058 Brassica rapa FPsc
Brara.I05049 5.0kb upstream 5.0kb upstream 5000 false A09: 41871781-41876780 Brassica rapa FPsc
Brara.I05049 5.0kb downstream 5.0kb downstream 6278 true A09: 41876781-41883058 Brassica rapa FPsc
Brara.I05049 5.0kb downstream 5.0kb downstream 5000 false A09: 41878059-41883058 Brassica rapa FPsc
Brara.I05049 10.0kb upstream 10.0kb upstream 11278 true A09: 41866781-41878058 Brassica rapa FPsc
Brara.I05049 10.0kb upstream 10.0kb upstream 10000 false A09: 41866781-41876780 Brassica rapa FPsc
Brara.I05049 10.0kb downstream 10.0kb downstream 11278 true A09: 41876781-41888058 Brassica rapa FPsc
Brara.I05049 10.0kb downstream 10.0kb downstream 10000 false A09: 41878059-41888058 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122353478 5261 Brassicaceae Singleton cluster - no MSA
123842656 5264 Brassicales-Malvales View MSA
124323674 5266 SBM View MSA
124169579 5268 Malvidae View MSA
123892493 5270 Rosid View MSA
123743747 5271 Pentapetalae View MSA
122794960 5272 Eudicot View MSA
122047550 5273 Angiosperm View MSA
121310758 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier