Gene : Brara.I04916 B. rapa FPsc v1.3
Defline:  (1 of 2) 1.3.1.78 - Arogenate dehydrogenase (NADP(+)) / TyrAAT2 Genomic Order:  4916
Name:  ? Brara.I04916 Secondary Identifier:  ? PAC:30645863
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-3461 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3481 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I04916 0.5kb upstream 0.5kb upstream 1752 true A09: 41235435-41237186 Brassica rapa FPsc
Brara.I04916 0.5kb upstream 0.5kb upstream 500 false A09: 41236687-41237186 Brassica rapa FPsc
Brara.I04916 0.5kb downstream 0.5kb downstream 1752 true A09: 41234935-41236686 Brassica rapa FPsc
Brara.I04916 0.5kb downstream 0.5kb downstream 500 false A09: 41234935-41235434 Brassica rapa FPsc
Brara.I04916 1.0kb upstream 1.0kb upstream 2252 true A09: 41235435-41237686 Brassica rapa FPsc
Brara.I04916 1.0kb upstream 1.0kb upstream 1000 false A09: 41236687-41237686 Brassica rapa FPsc
Brara.I04916 1.0kb downstream 1.0kb downstream 2252 true A09: 41234435-41236686 Brassica rapa FPsc
Brara.I04916 1.0kb downstream 1.0kb downstream 1000 false A09: 41234435-41235434 Brassica rapa FPsc
Brara.I04916 2.0kb upstream 2.0kb upstream 3252 true A09: 41235435-41238686 Brassica rapa FPsc
Brara.I04916 2.0kb upstream 2.0kb upstream 2000 false A09: 41236687-41238686 Brassica rapa FPsc
Brara.I04916 2.0kb downstream 2.0kb downstream 3252 true A09: 41233435-41236686 Brassica rapa FPsc
Brara.I04916 2.0kb downstream 2.0kb downstream 2000 false A09: 41233435-41235434 Brassica rapa FPsc
Brara.I04916 5.0kb upstream 5.0kb upstream 6252 true A09: 41235435-41241686 Brassica rapa FPsc
Brara.I04916 5.0kb upstream 5.0kb upstream 5000 false A09: 41236687-41241686 Brassica rapa FPsc
Brara.I04916 5.0kb downstream 5.0kb downstream 6252 true A09: 41230435-41236686 Brassica rapa FPsc
Brara.I04916 5.0kb downstream 5.0kb downstream 5000 false A09: 41230435-41235434 Brassica rapa FPsc
Brara.I04916 10.0kb upstream 10.0kb upstream 11252 true A09: 41235435-41246686 Brassica rapa FPsc
Brara.I04916 10.0kb upstream 10.0kb upstream 10000 false A09: 41236687-41246686 Brassica rapa FPsc
Brara.I04916 10.0kb downstream 10.0kb downstream 11252 true A09: 41225435-41236686 Brassica rapa FPsc
Brara.I04916 10.0kb downstream 10.0kb downstream 10000 false A09: 41225435-41235434 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369917 5261 Brassicaceae View MSA
123830710 5264 Brassicales-Malvales View MSA
124346336 5266 SBM View MSA
124247308 5268 Malvidae View MSA
124070774 5270 Rosid View MSA
123749744 5271 Pentapetalae View MSA
122797141 5272 Eudicot View MSA
122050819 5273 Angiosperm View MSA
121351682 5274 Embryophyte View MSA
123427304 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier