Gene : Brara.I04947 B. rapa FPsc v1.3
Defline:  (1 of 10) PTHR14155:SF175 - E3 UBIQUITIN-PROTEIN LIGASE RHA2B-RELATED Genomic Order:  4947
Name:  ? Brara.I04947 Secondary Identifier:  ? PAC:30644509
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I04947 0.5kb upstream 0.5kb upstream 1340 true A09: 41379650-41380989 Brassica rapa FPsc
Brara.I04947 0.5kb upstream 0.5kb upstream 500 false A09: 41379650-41380149 Brassica rapa FPsc
Brara.I04947 0.5kb downstream 0.5kb downstream 1340 true A09: 41380150-41381489 Brassica rapa FPsc
Brara.I04947 0.5kb downstream 0.5kb downstream 500 false A09: 41380990-41381489 Brassica rapa FPsc
Brara.I04947 1.0kb upstream 1.0kb upstream 1840 true A09: 41379150-41380989 Brassica rapa FPsc
Brara.I04947 1.0kb upstream 1.0kb upstream 1000 false A09: 41379150-41380149 Brassica rapa FPsc
Brara.I04947 1.0kb downstream 1.0kb downstream 1840 true A09: 41380150-41381989 Brassica rapa FPsc
Brara.I04947 1.0kb downstream 1.0kb downstream 1000 false A09: 41380990-41381989 Brassica rapa FPsc
Brara.I04947 2.0kb upstream 2.0kb upstream 2840 true A09: 41378150-41380989 Brassica rapa FPsc
Brara.I04947 2.0kb upstream 2.0kb upstream 2000 false A09: 41378150-41380149 Brassica rapa FPsc
Brara.I04947 2.0kb downstream 2.0kb downstream 2840 true A09: 41380150-41382989 Brassica rapa FPsc
Brara.I04947 2.0kb downstream 2.0kb downstream 2000 false A09: 41380990-41382989 Brassica rapa FPsc
Brara.I04947 5.0kb upstream 5.0kb upstream 5840 true A09: 41375150-41380989 Brassica rapa FPsc
Brara.I04947 5.0kb upstream 5.0kb upstream 5000 false A09: 41375150-41380149 Brassica rapa FPsc
Brara.I04947 5.0kb downstream 5.0kb downstream 5840 true A09: 41380150-41385989 Brassica rapa FPsc
Brara.I04947 5.0kb downstream 5.0kb downstream 5000 false A09: 41380990-41385989 Brassica rapa FPsc
Brara.I04947 10.0kb upstream 10.0kb upstream 10840 true A09: 41370150-41380989 Brassica rapa FPsc
Brara.I04947 10.0kb upstream 10.0kb upstream 10000 false A09: 41370150-41380149 Brassica rapa FPsc
Brara.I04947 10.0kb downstream 10.0kb downstream 10840 true A09: 41380150-41390989 Brassica rapa FPsc
Brara.I04947 10.0kb downstream 10.0kb downstream 10000 false A09: 41380990-41390989 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369063 5261 Brassicaceae View MSA
123827818 5264 Brassicales-Malvales View MSA
124343152 5266 SBM View MSA
124251223 5268 Malvidae View MSA
124069970 5270 Rosid View MSA
123750154 5271 Pentapetalae View MSA
122792700 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier