Gene : Brara.J00722 B. rapa FPsc v1.3
Defline:  (1 of 10) PTHR31080:SF2 - F23N19.14-RELATED Genomic Order:  722
Name:  ? Brara.J00722 Secondary Identifier:  ? PAC:30611848
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1081 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J00722 0.5kb upstream 0.5kb upstream 1300 true A10: 7016544-7017843 Brassica rapa FPsc
Brara.J00722 0.5kb upstream 0.5kb upstream 500 false A10: 7016544-7017043 Brassica rapa FPsc
Brara.J00722 0.5kb downstream 0.5kb downstream 1300 true A10: 7017044-7018343 Brassica rapa FPsc
Brara.J00722 0.5kb downstream 0.5kb downstream 500 false A10: 7017844-7018343 Brassica rapa FPsc
Brara.J00722 1.0kb upstream 1.0kb upstream 1800 true A10: 7016044-7017843 Brassica rapa FPsc
Brara.J00722 1.0kb upstream 1.0kb upstream 1000 false A10: 7016044-7017043 Brassica rapa FPsc
Brara.J00722 1.0kb downstream 1.0kb downstream 1800 true A10: 7017044-7018843 Brassica rapa FPsc
Brara.J00722 1.0kb downstream 1.0kb downstream 1000 false A10: 7017844-7018843 Brassica rapa FPsc
Brara.J00722 2.0kb upstream 2.0kb upstream 2800 true A10: 7015044-7017843 Brassica rapa FPsc
Brara.J00722 2.0kb upstream 2.0kb upstream 2000 false A10: 7015044-7017043 Brassica rapa FPsc
Brara.J00722 2.0kb downstream 2.0kb downstream 2800 true A10: 7017044-7019843 Brassica rapa FPsc
Brara.J00722 2.0kb downstream 2.0kb downstream 2000 false A10: 7017844-7019843 Brassica rapa FPsc
Brara.J00722 5.0kb upstream 5.0kb upstream 5800 true A10: 7012044-7017843 Brassica rapa FPsc
Brara.J00722 5.0kb upstream 5.0kb upstream 5000 false A10: 7012044-7017043 Brassica rapa FPsc
Brara.J00722 5.0kb downstream 5.0kb downstream 5800 true A10: 7017044-7022843 Brassica rapa FPsc
Brara.J00722 5.0kb downstream 5.0kb downstream 5000 false A10: 7017844-7022843 Brassica rapa FPsc
Brara.J00722 10.0kb upstream 10.0kb upstream 10800 true A10: 7007044-7017843 Brassica rapa FPsc
Brara.J00722 10.0kb upstream 10.0kb upstream 10000 false A10: 7007044-7017043 Brassica rapa FPsc
Brara.J00722 10.0kb downstream 10.0kb downstream 10800 true A10: 7017044-7027843 Brassica rapa FPsc
Brara.J00722 10.0kb downstream 10.0kb downstream 10000 false A10: 7017844-7027843 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122346043 5261 Brassicaceae Singleton cluster - no MSA
123785791 5264 Brassicales-Malvales Singleton cluster - no MSA
124283921 5266 SBM Singleton cluster - no MSA
124251328 5268 Malvidae View MSA
124069066 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier