Gene : Brara.I05390 B. rapa FPsc v1.3
Defline:  (1 of 10) PTHR10168:SF57 - GLUTAREDOXIN-C13-RELATED Genomic Order:  5390
Name:  ? Brara.I05390 Secondary Identifier:  ? PAC:30643272
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc THIOREDOX-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I05390 0.5kb upstream 0.5kb upstream 800 true A09: 43655647-43656446 Brassica rapa FPsc
Brara.I05390 0.5kb upstream 0.5kb upstream 500 false A09: 43655947-43656446 Brassica rapa FPsc
Brara.I05390 0.5kb downstream 0.5kb downstream 800 true A09: 43655147-43655946 Brassica rapa FPsc
Brara.I05390 0.5kb downstream 0.5kb downstream 500 false A09: 43655147-43655646 Brassica rapa FPsc
Brara.I05390 1.0kb upstream 1.0kb upstream 1300 true A09: 43655647-43656946 Brassica rapa FPsc
Brara.I05390 1.0kb upstream 1.0kb upstream 1000 false A09: 43655947-43656946 Brassica rapa FPsc
Brara.I05390 1.0kb downstream 1.0kb downstream 1300 true A09: 43654647-43655946 Brassica rapa FPsc
Brara.I05390 1.0kb downstream 1.0kb downstream 1000 false A09: 43654647-43655646 Brassica rapa FPsc
Brara.I05390 2.0kb upstream 2.0kb upstream 2300 true A09: 43655647-43657946 Brassica rapa FPsc
Brara.I05390 2.0kb upstream 2.0kb upstream 2000 false A09: 43655947-43657946 Brassica rapa FPsc
Brara.I05390 2.0kb downstream 2.0kb downstream 2300 true A09: 43653647-43655946 Brassica rapa FPsc
Brara.I05390 2.0kb downstream 2.0kb downstream 2000 false A09: 43653647-43655646 Brassica rapa FPsc
Brara.I05390 5.0kb upstream 5.0kb upstream 5300 true A09: 43655647-43660946 Brassica rapa FPsc
Brara.I05390 5.0kb upstream 5.0kb upstream 5000 false A09: 43655947-43660946 Brassica rapa FPsc
Brara.I05390 5.0kb downstream 5.0kb downstream 5300 true A09: 43650647-43655946 Brassica rapa FPsc
Brara.I05390 5.0kb downstream 5.0kb downstream 5000 false A09: 43650647-43655646 Brassica rapa FPsc
Brara.I05390 10.0kb upstream 10.0kb upstream 10300 true A09: 43655647-43665946 Brassica rapa FPsc
Brara.I05390 10.0kb upstream 10.0kb upstream 10000 false A09: 43655947-43665946 Brassica rapa FPsc
Brara.I05390 10.0kb downstream 10.0kb downstream 10300 true A09: 43645647-43655946 Brassica rapa FPsc
Brara.I05390 10.0kb downstream 10.0kb downstream 10000 false A09: 43645647-43655646 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028026 5273 Angiosperm View MSA
122353864 5261 Brassicaceae Singleton cluster - no MSA
123839290 5264 Brassicales-Malvales View MSA
124342010 5266 SBM View MSA
124253588 5268 Malvidae View MSA
124060957 5270 Rosid View MSA
123747538 5271 Pentapetalae View MSA
122788985 5272 Eudicot View MSA
121297578 5274 Embryophyte View MSA
123335620 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier