Gene : Brara.J01000 B. rapa FPsc v1.3

Defline:  (1 of 1) PTHR31636:SF25 - SCARECROW-LIKE PROTEIN 26 Genomic Order:  1000
Name:  ? Brara.J01000 Secondary Identifier:  ? PAC:30614472

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J01000 0.5kb upstream 0.5kb upstream 1958 true A10: 9842178-9844135 Brassica rapa FPsc
Brara.J01000 0.5kb upstream 0.5kb upstream 500 false A10: 9843636-9844135 Brassica rapa FPsc
Brara.J01000 0.5kb downstream 0.5kb downstream 1958 true A10: 9841678-9843635 Brassica rapa FPsc
Brara.J01000 0.5kb downstream 0.5kb downstream 500 false A10: 9841678-9842177 Brassica rapa FPsc
Brara.J01000 1.0kb upstream 1.0kb upstream 2458 true A10: 9842178-9844635 Brassica rapa FPsc
Brara.J01000 1.0kb upstream 1.0kb upstream 1000 false A10: 9843636-9844635 Brassica rapa FPsc
Brara.J01000 1.0kb downstream 1.0kb downstream 2458 true A10: 9841178-9843635 Brassica rapa FPsc
Brara.J01000 1.0kb downstream 1.0kb downstream 1000 false A10: 9841178-9842177 Brassica rapa FPsc
Brara.J01000 2.0kb upstream 2.0kb upstream 3458 true A10: 9842178-9845635 Brassica rapa FPsc
Brara.J01000 2.0kb upstream 2.0kb upstream 2000 false A10: 9843636-9845635 Brassica rapa FPsc
Brara.J01000 2.0kb downstream 2.0kb downstream 3458 true A10: 9840178-9843635 Brassica rapa FPsc
Brara.J01000 2.0kb downstream 2.0kb downstream 2000 false A10: 9840178-9842177 Brassica rapa FPsc
Brara.J01000 5.0kb upstream 5.0kb upstream 6458 true A10: 9842178-9848635 Brassica rapa FPsc
Brara.J01000 5.0kb upstream 5.0kb upstream 5000 false A10: 9843636-9848635 Brassica rapa FPsc
Brara.J01000 5.0kb downstream 5.0kb downstream 6458 true A10: 9837178-9843635 Brassica rapa FPsc
Brara.J01000 5.0kb downstream 5.0kb downstream 5000 false A10: 9837178-9842177 Brassica rapa FPsc
Brara.J01000 10.0kb upstream 10.0kb upstream 11458 true A10: 9842178-9853635 Brassica rapa FPsc
Brara.J01000 10.0kb upstream 10.0kb upstream 10000 false A10: 9843636-9853635 Brassica rapa FPsc
Brara.J01000 10.0kb downstream 10.0kb downstream 11458 true A10: 9832178-9843635 Brassica rapa FPsc
Brara.J01000 10.0kb downstream 10.0kb downstream 10000 false A10: 9832178-9842177 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361130 5261 Brassicaceae View MSA
123830757 5264 Brassicales-Malvales View MSA
124341223 5266 SBM View MSA
124253656 5268 Malvidae View MSA
124066104 5270 Rosid View MSA
123741330 5271 Pentapetalae View MSA
122785836 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier