Gene : Brara.J01377 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR12606:SF15 - NEDD8-SPECIFIC PROTEASE 1 Genomic Order:  1377
Name:  ? Brara.J01377 Secondary Identifier:  ? PAC:30613854
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J01377 0.5kb upstream 0.5kb upstream 1607 true A10: 12286137-12287743 Brassica rapa FPsc
Brara.J01377 0.5kb upstream 0.5kb upstream 500 false A10: 12286137-12286636 Brassica rapa FPsc
Brara.J01377 0.5kb downstream 0.5kb downstream 1607 true A10: 12286637-12288243 Brassica rapa FPsc
Brara.J01377 0.5kb downstream 0.5kb downstream 500 false A10: 12287744-12288243 Brassica rapa FPsc
Brara.J01377 1.0kb upstream 1.0kb upstream 2107 true A10: 12285637-12287743 Brassica rapa FPsc
Brara.J01377 1.0kb upstream 1.0kb upstream 1000 false A10: 12285637-12286636 Brassica rapa FPsc
Brara.J01377 1.0kb downstream 1.0kb downstream 2107 true A10: 12286637-12288743 Brassica rapa FPsc
Brara.J01377 1.0kb downstream 1.0kb downstream 1000 false A10: 12287744-12288743 Brassica rapa FPsc
Brara.J01377 2.0kb upstream 2.0kb upstream 3107 true A10: 12284637-12287743 Brassica rapa FPsc
Brara.J01377 2.0kb upstream 2.0kb upstream 2000 false A10: 12284637-12286636 Brassica rapa FPsc
Brara.J01377 2.0kb downstream 2.0kb downstream 3107 true A10: 12286637-12289743 Brassica rapa FPsc
Brara.J01377 2.0kb downstream 2.0kb downstream 2000 false A10: 12287744-12289743 Brassica rapa FPsc
Brara.J01377 5.0kb upstream 5.0kb upstream 6107 true A10: 12281637-12287743 Brassica rapa FPsc
Brara.J01377 5.0kb upstream 5.0kb upstream 5000 false A10: 12281637-12286636 Brassica rapa FPsc
Brara.J01377 5.0kb downstream 5.0kb downstream 6107 true A10: 12286637-12292743 Brassica rapa FPsc
Brara.J01377 5.0kb downstream 5.0kb downstream 5000 false A10: 12287744-12292743 Brassica rapa FPsc
Brara.J01377 10.0kb upstream 10.0kb upstream 11107 true A10: 12276637-12287743 Brassica rapa FPsc
Brara.J01377 10.0kb upstream 10.0kb upstream 10000 false A10: 12276637-12286636 Brassica rapa FPsc
Brara.J01377 10.0kb downstream 10.0kb downstream 11107 true A10: 12286637-12297743 Brassica rapa FPsc
Brara.J01377 10.0kb downstream 10.0kb downstream 10000 false A10: 12287744-12297743 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375929 5261 Brassicaceae View MSA
123832313 5264 Brassicales-Malvales View MSA
124342759 5266 SBM View MSA
124246104 5268 Malvidae View MSA
124065120 5270 Rosid View MSA
123744954 5271 Pentapetalae View MSA
122791121 5272 Eudicot View MSA
122044999 5273 Angiosperm View MSA
121348987 5274 Embryophyte View MSA
123428480 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier