Gene : Brara.J01690 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11570:SF1 - S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME Genomic Order:  1690
Name:  ? Brara.J01690 Secondary Identifier:  ? PAC:30612842
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ARGSPECAT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc BSUBPOLYAMSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7528 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J01690 0.5kb upstream 0.5kb upstream 1936 true A10: 14234685-14236620 Brassica rapa FPsc
Brara.J01690 0.5kb upstream 0.5kb upstream 500 false A10: 14234685-14235184 Brassica rapa FPsc
Brara.J01690 0.5kb downstream 0.5kb downstream 1936 true A10: 14235185-14237120 Brassica rapa FPsc
Brara.J01690 0.5kb downstream 0.5kb downstream 500 false A10: 14236621-14237120 Brassica rapa FPsc
Brara.J01690 1.0kb upstream 1.0kb upstream 2436 true A10: 14234185-14236620 Brassica rapa FPsc
Brara.J01690 1.0kb upstream 1.0kb upstream 1000 false A10: 14234185-14235184 Brassica rapa FPsc
Brara.J01690 1.0kb downstream 1.0kb downstream 2436 true A10: 14235185-14237620 Brassica rapa FPsc
Brara.J01690 1.0kb downstream 1.0kb downstream 1000 false A10: 14236621-14237620 Brassica rapa FPsc
Brara.J01690 2.0kb upstream 2.0kb upstream 3436 true A10: 14233185-14236620 Brassica rapa FPsc
Brara.J01690 2.0kb upstream 2.0kb upstream 2000 false A10: 14233185-14235184 Brassica rapa FPsc
Brara.J01690 2.0kb downstream 2.0kb downstream 3436 true A10: 14235185-14238620 Brassica rapa FPsc
Brara.J01690 2.0kb downstream 2.0kb downstream 2000 false A10: 14236621-14238620 Brassica rapa FPsc
Brara.J01690 5.0kb upstream 5.0kb upstream 6436 true A10: 14230185-14236620 Brassica rapa FPsc
Brara.J01690 5.0kb upstream 5.0kb upstream 5000 false A10: 14230185-14235184 Brassica rapa FPsc
Brara.J01690 5.0kb downstream 5.0kb downstream 6436 true A10: 14235185-14241620 Brassica rapa FPsc
Brara.J01690 5.0kb downstream 5.0kb downstream 5000 false A10: 14236621-14241620 Brassica rapa FPsc
Brara.J01690 10.0kb upstream 10.0kb upstream 11436 true A10: 14225185-14236620 Brassica rapa FPsc
Brara.J01690 10.0kb upstream 10.0kb upstream 10000 false A10: 14225185-14235184 Brassica rapa FPsc
Brara.J01690 10.0kb downstream 10.0kb downstream 11436 true A10: 14235185-14246620 Brassica rapa FPsc
Brara.J01690 10.0kb downstream 10.0kb downstream 10000 false A10: 14236621-14246620 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370736 5261 Brassicaceae View MSA
123835642 5264 Brassicales-Malvales View MSA
124338711 5266 SBM View MSA
124250862 5268 Malvidae View MSA
124061070 5270 Rosid View MSA
123751266 5271 Pentapetalae View MSA
122795098 5272 Eudicot View MSA
122049143 5273 Angiosperm View MSA
121348944 5274 Embryophyte View MSA
123423800 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier