Gene : Brara.J02472 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR31311:SF4 - GLYCOSYLTRANSFERASE 3-RELATED Genomic Order:  2472
Name:  ? Brara.J02472 Secondary Identifier:  ? PAC:30613283
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5936 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J02472 0.5kb upstream 0.5kb upstream 1868 true A10: 17837150-17839017 Brassica rapa FPsc
Brara.J02472 0.5kb upstream 0.5kb upstream 500 false A10: 17838518-17839017 Brassica rapa FPsc
Brara.J02472 0.5kb downstream 0.5kb downstream 1868 true A10: 17836650-17838517 Brassica rapa FPsc
Brara.J02472 0.5kb downstream 0.5kb downstream 500 false A10: 17836650-17837149 Brassica rapa FPsc
Brara.J02472 1.0kb upstream 1.0kb upstream 2368 true A10: 17837150-17839517 Brassica rapa FPsc
Brara.J02472 1.0kb upstream 1.0kb upstream 1000 false A10: 17838518-17839517 Brassica rapa FPsc
Brara.J02472 1.0kb downstream 1.0kb downstream 2368 true A10: 17836150-17838517 Brassica rapa FPsc
Brara.J02472 1.0kb downstream 1.0kb downstream 1000 false A10: 17836150-17837149 Brassica rapa FPsc
Brara.J02472 2.0kb upstream 2.0kb upstream 3368 true A10: 17837150-17840517 Brassica rapa FPsc
Brara.J02472 2.0kb upstream 2.0kb upstream 2000 false A10: 17838518-17840517 Brassica rapa FPsc
Brara.J02472 2.0kb downstream 2.0kb downstream 3368 true A10: 17835150-17838517 Brassica rapa FPsc
Brara.J02472 2.0kb downstream 2.0kb downstream 2000 false A10: 17835150-17837149 Brassica rapa FPsc
Brara.J02472 5.0kb upstream 5.0kb upstream 6368 true A10: 17837150-17843517 Brassica rapa FPsc
Brara.J02472 5.0kb upstream 5.0kb upstream 5000 false A10: 17838518-17843517 Brassica rapa FPsc
Brara.J02472 5.0kb downstream 5.0kb downstream 6368 true A10: 17832150-17838517 Brassica rapa FPsc
Brara.J02472 5.0kb downstream 5.0kb downstream 5000 false A10: 17832150-17837149 Brassica rapa FPsc
Brara.J02472 10.0kb upstream 10.0kb upstream 11368 true A10: 17837150-17848517 Brassica rapa FPsc
Brara.J02472 10.0kb upstream 10.0kb upstream 10000 false A10: 17838518-17848517 Brassica rapa FPsc
Brara.J02472 10.0kb downstream 10.0kb downstream 11368 true A10: 17827150-17838517 Brassica rapa FPsc
Brara.J02472 10.0kb downstream 10.0kb downstream 10000 false A10: 17827150-17837149 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364851 5261 Brassicaceae View MSA
123798849 5264 Brassicales-Malvales View MSA
124296432 5266 SBM View MSA
124148587 5268 Malvidae View MSA
124066918 5270 Rosid View MSA
123741049 5271 Pentapetalae View MSA
122787674 5272 Eudicot View MSA
122047290 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier