Gene : Brara.K00422 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR33057:SF10 - OVATE FAMILY PROTEIN 5 Genomic Order:  7
Name:  ? Brara.K00422 Secondary Identifier:  ? PAC:30606820
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00422 0.5kb upstream 0.5kb upstream 1472 true Scaffold18850: 33343-34814 Brassica rapa FPsc
Brara.K00422 0.5kb upstream 0.5kb upstream 500 false Scaffold18850: 34315-34814 Brassica rapa FPsc
Brara.K00422 0.5kb downstream 0.5kb downstream 1472 true Scaffold18850: 32843-34314 Brassica rapa FPsc
Brara.K00422 0.5kb downstream 0.5kb downstream 500 false Scaffold18850: 32843-33342 Brassica rapa FPsc
Brara.K00422 1.0kb upstream 1.0kb upstream 1972 true Scaffold18850: 33343-35314 Brassica rapa FPsc
Brara.K00422 1.0kb upstream 1.0kb upstream 1000 false Scaffold18850: 34315-35314 Brassica rapa FPsc
Brara.K00422 1.0kb downstream 1.0kb downstream 1972 true Scaffold18850: 32343-34314 Brassica rapa FPsc
Brara.K00422 1.0kb downstream 1.0kb downstream 1000 false Scaffold18850: 32343-33342 Brassica rapa FPsc
Brara.K00422 2.0kb upstream 2.0kb upstream 2972 true Scaffold18850: 33343-36314 Brassica rapa FPsc
Brara.K00422 2.0kb upstream 2.0kb upstream 2000 false Scaffold18850: 34315-36314 Brassica rapa FPsc
Brara.K00422 2.0kb downstream 2.0kb downstream 2972 true Scaffold18850: 31343-34314 Brassica rapa FPsc
Brara.K00422 2.0kb downstream 2.0kb downstream 2000 false Scaffold18850: 31343-33342 Brassica rapa FPsc
Brara.K00422 5.0kb upstream 5.0kb upstream 5972 true Scaffold18850: 33343-39314 Brassica rapa FPsc
Brara.K00422 5.0kb upstream 5.0kb upstream 5000 false Scaffold18850: 34315-39314 Brassica rapa FPsc
Brara.K00422 5.0kb downstream 5.0kb downstream 5972 true Scaffold18850: 28343-34314 Brassica rapa FPsc
Brara.K00422 5.0kb downstream 5.0kb downstream 5000 false Scaffold18850: 28343-33342 Brassica rapa FPsc
Brara.K00422 10.0kb upstream 10.0kb upstream 10972 true Scaffold18850: 33343-44314 Brassica rapa FPsc
Brara.K00422 10.0kb upstream 10.0kb upstream 10000 false Scaffold18850: 34315-44314 Brassica rapa FPsc
Brara.K00422 10.0kb downstream 10.0kb downstream 10972 true Scaffold18850: 23343-34314 Brassica rapa FPsc
Brara.K00422 10.0kb downstream 10.0kb downstream 10000 false Scaffold18850: 23343-33342 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344465 5261 Brassicaceae Singleton cluster - no MSA
123784469 5264 Brassicales-Malvales Singleton cluster - no MSA
124282643 5266 SBM Singleton cluster - no MSA
124251563 5268 Malvidae View MSA
124050737 5270 Rosid View MSA
123750394 5271 Pentapetalae View MSA
122789866 5272 Eudicot View MSA
122048787 5273 Angiosperm View MSA
121311113 5274 Embryophyte View MSA
123348456 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier