Gene : Brara.K00332 B. rapa FPsc v1.3
Defline:  (1 of 1) 1.13.12.1 - Arginine 2-monooxygenase / Arginine oxygenase (decarboxylating) Genomic Order:  20
Name:  ? Brara.K00332 Secondary Identifier:  ? PAC:30627519
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ARGDEG-V-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-43 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00332 0.5kb upstream 0.5kb upstream 2570 true Scaffold14751: 179987-182556 Brassica rapa FPsc
Brara.K00332 0.5kb upstream 0.5kb upstream 500 false Scaffold14751: 179987-180486 Brassica rapa FPsc
Brara.K00332 0.5kb downstream 0.5kb downstream 2570 true Scaffold14751: 180487-183056 Brassica rapa FPsc
Brara.K00332 0.5kb downstream 0.5kb downstream 500 false Scaffold14751: 182557-183056 Brassica rapa FPsc
Brara.K00332 1.0kb upstream 1.0kb upstream 3070 true Scaffold14751: 179487-182556 Brassica rapa FPsc
Brara.K00332 1.0kb upstream 1.0kb upstream 1000 false Scaffold14751: 179487-180486 Brassica rapa FPsc
Brara.K00332 1.0kb downstream 1.0kb downstream 3070 true Scaffold14751: 180487-183556 Brassica rapa FPsc
Brara.K00332 1.0kb downstream 1.0kb downstream 1000 false Scaffold14751: 182557-183556 Brassica rapa FPsc
Brara.K00332 2.0kb upstream 2.0kb upstream 4070 true Scaffold14751: 178487-182556 Brassica rapa FPsc
Brara.K00332 2.0kb upstream 2.0kb upstream 2000 false Scaffold14751: 178487-180486 Brassica rapa FPsc
Brara.K00332 2.0kb downstream 2.0kb downstream 4070 true Scaffold14751: 180487-184556 Brassica rapa FPsc
Brara.K00332 2.0kb downstream 2.0kb downstream 2000 false Scaffold14751: 182557-184556 Brassica rapa FPsc
Brara.K00332 5.0kb upstream 5.0kb upstream 7070 true Scaffold14751: 175487-182556 Brassica rapa FPsc
Brara.K00332 5.0kb upstream 5.0kb upstream 5000 false Scaffold14751: 175487-180486 Brassica rapa FPsc
Brara.K00332 5.0kb downstream 5.0kb downstream 7070 true Scaffold14751: 180487-187556 Brassica rapa FPsc
Brara.K00332 5.0kb downstream 5.0kb downstream 5000 false Scaffold14751: 182557-187556 Brassica rapa FPsc
Brara.K00332 10.0kb upstream 10.0kb upstream 12070 true Scaffold14751: 170487-182556 Brassica rapa FPsc
Brara.K00332 10.0kb upstream 10.0kb upstream 10000 false Scaffold14751: 170487-180486 Brassica rapa FPsc
Brara.K00332 10.0kb downstream 10.0kb downstream 12070 true Scaffold14751: 180487-192556 Brassica rapa FPsc
Brara.K00332 10.0kb downstream 10.0kb downstream 10000 false Scaffold14751: 182557-192556 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369199 5261 Brassicaceae View MSA
123827460 5264 Brassicales-Malvales View MSA
124337522 5266 SBM View MSA
124242922 5268 Malvidae View MSA
124064588 5270 Rosid View MSA
123739718 5271 Pentapetalae View MSA
122791004 5272 Eudicot View MSA
122046464 5273 Angiosperm View MSA
121350786 5274 Embryophyte View MSA
123424715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier