Gene : Brara.K00718 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR Genomic Order:  16
Name:  ? Brara.K00718 Secondary Identifier:  ? PAC:30614534
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00718 0.5kb upstream 0.5kb upstream 1433 true Scaffold25053: 164827-166259 Brassica rapa FPsc
Brara.K00718 0.5kb upstream 0.5kb upstream 500 false Scaffold25053: 164827-165326 Brassica rapa FPsc
Brara.K00718 0.5kb downstream 0.5kb downstream 1433 true Scaffold25053: 165327-166759 Brassica rapa FPsc
Brara.K00718 0.5kb downstream 0.5kb downstream 500 false Scaffold25053: 166260-166759 Brassica rapa FPsc
Brara.K00718 1.0kb upstream 1.0kb upstream 1933 true Scaffold25053: 164327-166259 Brassica rapa FPsc
Brara.K00718 1.0kb upstream 1.0kb upstream 1000 false Scaffold25053: 164327-165326 Brassica rapa FPsc
Brara.K00718 1.0kb downstream 1.0kb downstream 1933 true Scaffold25053: 165327-167259 Brassica rapa FPsc
Brara.K00718 1.0kb downstream 1.0kb downstream 1000 false Scaffold25053: 166260-167259 Brassica rapa FPsc
Brara.K00718 2.0kb upstream 2.0kb upstream 2933 true Scaffold25053: 163327-166259 Brassica rapa FPsc
Brara.K00718 2.0kb upstream 2.0kb upstream 2000 false Scaffold25053: 163327-165326 Brassica rapa FPsc
Brara.K00718 2.0kb downstream 2.0kb downstream 2933 true Scaffold25053: 165327-168259 Brassica rapa FPsc
Brara.K00718 2.0kb downstream 2.0kb downstream 2000 false Scaffold25053: 166260-168259 Brassica rapa FPsc
Brara.K00718 5.0kb upstream 5.0kb upstream 5933 true Scaffold25053: 160327-166259 Brassica rapa FPsc
Brara.K00718 5.0kb upstream 5.0kb upstream 5000 false Scaffold25053: 160327-165326 Brassica rapa FPsc
Brara.K00718 5.0kb downstream 5.0kb downstream 5933 true Scaffold25053: 165327-171259 Brassica rapa FPsc
Brara.K00718 5.0kb downstream 5.0kb downstream 5000 false Scaffold25053: 166260-171259 Brassica rapa FPsc
Brara.K00718 10.0kb upstream 10.0kb upstream 10933 true Scaffold25053: 155327-166259 Brassica rapa FPsc
Brara.K00718 10.0kb upstream 10.0kb upstream 10000 false Scaffold25053: 155327-165326 Brassica rapa FPsc
Brara.K00718 10.0kb downstream 10.0kb downstream 10933 true Scaffold25053: 165327-176259 Brassica rapa FPsc
Brara.K00718 10.0kb downstream 10.0kb downstream 10000 false Scaffold25053: 166260-176259 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122346642 5261 Brassicaceae Singleton cluster - no MSA
123840121 5264 Brassicales-Malvales View MSA
124344965 5266 SBM View MSA
124250178 5268 Malvidae View MSA
124071112 5270 Rosid View MSA
123744943 5271 Pentapetalae View MSA
122797737 5272 Eudicot View MSA
122048577 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier