Gene : Brara.K00617 B. rapa FPsc v1.3
Defline:  (1 of 21) PF04759 - Protein of unknown function, DUF617 (DUF617) Genomic Order:  5
Name:  ? Brara.K00617 Secondary Identifier:  ? PAC:30606739
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00617 0.5kb upstream 0.5kb upstream 1253 true Scaffold24071: 28628-29880 Brassica rapa FPsc
Brara.K00617 0.5kb upstream 0.5kb upstream 500 false Scaffold24071: 29381-29880 Brassica rapa FPsc
Brara.K00617 0.5kb downstream 0.5kb downstream 1253 true Scaffold24071: 28128-29380 Brassica rapa FPsc
Brara.K00617 0.5kb downstream 0.5kb downstream 500 false Scaffold24071: 28128-28627 Brassica rapa FPsc
Brara.K00617 1.0kb upstream 1.0kb upstream 1597 true Scaffold24071: 28628-30224 Brassica rapa FPsc
Brara.K00617 1.0kb upstream 1.0kb upstream 844 false Scaffold24071: 29381-30224 Brassica rapa FPsc
Brara.K00617 1.0kb downstream 1.0kb downstream 1753 true Scaffold24071: 27628-29380 Brassica rapa FPsc
Brara.K00617 1.0kb downstream 1.0kb downstream 1000 false Scaffold24071: 27628-28627 Brassica rapa FPsc
Brara.K00617 2.0kb upstream 2.0kb upstream 1597 true Scaffold24071: 28628-30224 Brassica rapa FPsc
Brara.K00617 2.0kb upstream 2.0kb upstream 844 false Scaffold24071: 29381-30224 Brassica rapa FPsc
Brara.K00617 2.0kb downstream 2.0kb downstream 2753 true Scaffold24071: 26628-29380 Brassica rapa FPsc
Brara.K00617 2.0kb downstream 2.0kb downstream 2000 false Scaffold24071: 26628-28627 Brassica rapa FPsc
Brara.K00617 5.0kb upstream 5.0kb upstream 1597 true Scaffold24071: 28628-30224 Brassica rapa FPsc
Brara.K00617 5.0kb upstream 5.0kb upstream 844 false Scaffold24071: 29381-30224 Brassica rapa FPsc
Brara.K00617 5.0kb downstream 5.0kb downstream 5753 true Scaffold24071: 23628-29380 Brassica rapa FPsc
Brara.K00617 5.0kb downstream 5.0kb downstream 5000 false Scaffold24071: 23628-28627 Brassica rapa FPsc
Brara.K00617 10.0kb upstream 10.0kb upstream 1597 true Scaffold24071: 28628-30224 Brassica rapa FPsc
Brara.K00617 10.0kb upstream 10.0kb upstream 844 false Scaffold24071: 29381-30224 Brassica rapa FPsc
Brara.K00617 10.0kb downstream 10.0kb downstream 10753 true Scaffold24071: 18628-29380 Brassica rapa FPsc
Brara.K00617 10.0kb downstream 10.0kb downstream 10000 false Scaffold24071: 18628-28627 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344443 5261 Brassicaceae Singleton cluster - no MSA
123784453 5264 Brassicales-Malvales Singleton cluster - no MSA
124282628 5266 SBM Singleton cluster - no MSA
124137184 5268 Malvidae Singleton cluster - no MSA
123864931 5270 Rosid Singleton cluster - no MSA
123751387 5271 Pentapetalae View MSA
122796767 5272 Eudicot View MSA
122047033 5273 Angiosperm View MSA
121349765 5274 Embryophyte View MSA
123381434 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier