Gene : Brara.K00624 B. rapa FPsc v1.3
Defline:  (1 of 10) PF12767 - Transcriptional regulator of RNA polII, SAGA, subunit (SAGA-Tad1) Genomic Order:  4
Name:  ? Brara.K00624 Secondary Identifier:  ? PAC:30606643
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00624 0.5kb upstream 0.5kb upstream 1355 true Scaffold25010: 29547-30901 Brassica rapa FPsc
Brara.K00624 0.5kb upstream 0.5kb upstream 500 false Scaffold25010: 29547-30046 Brassica rapa FPsc
Brara.K00624 0.5kb downstream 0.5kb downstream 1355 true Scaffold25010: 30047-31401 Brassica rapa FPsc
Brara.K00624 0.5kb downstream 0.5kb downstream 500 false Scaffold25010: 30902-31401 Brassica rapa FPsc
Brara.K00624 1.0kb upstream 1.0kb upstream 1855 true Scaffold25010: 29047-30901 Brassica rapa FPsc
Brara.K00624 1.0kb upstream 1.0kb upstream 1000 false Scaffold25010: 29047-30046 Brassica rapa FPsc
Brara.K00624 1.0kb downstream 1.0kb downstream 1855 true Scaffold25010: 30047-31901 Brassica rapa FPsc
Brara.K00624 1.0kb downstream 1.0kb downstream 1000 false Scaffold25010: 30902-31901 Brassica rapa FPsc
Brara.K00624 2.0kb upstream 2.0kb upstream 2855 true Scaffold25010: 28047-30901 Brassica rapa FPsc
Brara.K00624 2.0kb upstream 2.0kb upstream 2000 false Scaffold25010: 28047-30046 Brassica rapa FPsc
Brara.K00624 2.0kb downstream 2.0kb downstream 2855 true Scaffold25010: 30047-32901 Brassica rapa FPsc
Brara.K00624 2.0kb downstream 2.0kb downstream 2000 false Scaffold25010: 30902-32901 Brassica rapa FPsc
Brara.K00624 5.0kb upstream 5.0kb upstream 5855 true Scaffold25010: 25047-30901 Brassica rapa FPsc
Brara.K00624 5.0kb upstream 5.0kb upstream 5000 false Scaffold25010: 25047-30046 Brassica rapa FPsc
Brara.K00624 5.0kb downstream 5.0kb downstream 5855 true Scaffold25010: 30047-35901 Brassica rapa FPsc
Brara.K00624 5.0kb downstream 5.0kb downstream 5000 false Scaffold25010: 30902-35901 Brassica rapa FPsc
Brara.K00624 10.0kb upstream 10.0kb upstream 10855 true Scaffold25010: 20047-30901 Brassica rapa FPsc
Brara.K00624 10.0kb upstream 10.0kb upstream 10000 false Scaffold25010: 20047-30046 Brassica rapa FPsc
Brara.K00624 10.0kb downstream 10.0kb downstream 10855 true Scaffold25010: 30047-40901 Brassica rapa FPsc
Brara.K00624 10.0kb downstream 10.0kb downstream 10000 false Scaffold25010: 30902-40901 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362161 5261 Brassicaceae View MSA
123834752 5264 Brassicales-Malvales View MSA
124345526 5266 SBM View MSA
124251917 5268 Malvidae View MSA
124060712 5270 Rosid View MSA
123743282 5271 Pentapetalae View MSA
122790089 5272 Eudicot View MSA
122050052 5273 Angiosperm View MSA
121311708 5274 Embryophyte View MSA
123348971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

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