Gene : Brara.K01083 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR33269:SF4 - NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 6 Genomic Order:  1
Name:  ? Brara.K01083 Secondary Identifier:  ? PAC:30627408
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-3781 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-4302 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5083 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01083 0.5kb upstream 0.5kb upstream 636 true Scaffold45677: 1-636 Brassica rapa FPsc
Brara.K01083 0.5kb upstream 0.5kb upstream 18 false Scaffold45677: 1-18 Brassica rapa FPsc
Brara.K01083 0.5kb downstream 0.5kb downstream 1118 true Scaffold45677: 19-1136 Brassica rapa FPsc
Brara.K01083 0.5kb downstream 0.5kb downstream 500 false Scaffold45677: 637-1136 Brassica rapa FPsc
Brara.K01083 1.0kb upstream 1.0kb upstream 636 true Scaffold45677: 1-636 Brassica rapa FPsc
Brara.K01083 1.0kb upstream 1.0kb upstream 18 false Scaffold45677: 1-18 Brassica rapa FPsc
Brara.K01083 1.0kb downstream 1.0kb downstream 1152 true Scaffold45677: 19-1170 Brassica rapa FPsc
Brara.K01083 1.0kb downstream 1.0kb downstream 534 false Scaffold45677: 637-1170 Brassica rapa FPsc
Brara.K01083 2.0kb upstream 2.0kb upstream 636 true Scaffold45677: 1-636 Brassica rapa FPsc
Brara.K01083 2.0kb upstream 2.0kb upstream 18 false Scaffold45677: 1-18 Brassica rapa FPsc
Brara.K01083 2.0kb downstream 2.0kb downstream 1152 true Scaffold45677: 19-1170 Brassica rapa FPsc
Brara.K01083 2.0kb downstream 2.0kb downstream 534 false Scaffold45677: 637-1170 Brassica rapa FPsc
Brara.K01083 5.0kb upstream 5.0kb upstream 636 true Scaffold45677: 1-636 Brassica rapa FPsc
Brara.K01083 5.0kb upstream 5.0kb upstream 18 false Scaffold45677: 1-18 Brassica rapa FPsc
Brara.K01083 5.0kb downstream 5.0kb downstream 1152 true Scaffold45677: 19-1170 Brassica rapa FPsc
Brara.K01083 5.0kb downstream 5.0kb downstream 534 false Scaffold45677: 637-1170 Brassica rapa FPsc
Brara.K01083 10.0kb upstream 10.0kb upstream 636 true Scaffold45677: 1-636 Brassica rapa FPsc
Brara.K01083 10.0kb upstream 10.0kb upstream 18 false Scaffold45677: 1-18 Brassica rapa FPsc
Brara.K01083 10.0kb downstream 10.0kb downstream 1152 true Scaffold45677: 19-1170 Brassica rapa FPsc
Brara.K01083 10.0kb downstream 10.0kb downstream 534 false Scaffold45677: 637-1170 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026690 5273 Angiosperm View MSA
122378882 5261 Brassicaceae View MSA
123837468 5264 Brassicales-Malvales View MSA
124322314 5266 SBM View MSA
124247829 5268 Malvidae View MSA
124037547 5270 Rosid View MSA
123742192 5271 Pentapetalae View MSA
122795157 5272 Eudicot View MSA
121350448 5274 Embryophyte View MSA
123381738 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier