Gene : Brara.K00885 B. rapa FPsc v1.3
Defline:  (1 of 4) 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase Genomic Order:  71
Name:  ? Brara.K00885 Secondary Identifier:  ? PAC:30640598
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6556 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7193 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7196 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7199 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7200 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00885 0.5kb upstream 0.5kb upstream 1424 true Scaffold31002: 539650-541073 Brassica rapa FPsc
Brara.K00885 0.5kb upstream 0.5kb upstream 500 false Scaffold31002: 540574-541073 Brassica rapa FPsc
Brara.K00885 0.5kb downstream 0.5kb downstream 1424 true Scaffold31002: 539150-540573 Brassica rapa FPsc
Brara.K00885 0.5kb downstream 0.5kb downstream 500 false Scaffold31002: 539150-539649 Brassica rapa FPsc
Brara.K00885 1.0kb upstream 1.0kb upstream 1924 true Scaffold31002: 539650-541573 Brassica rapa FPsc
Brara.K00885 1.0kb upstream 1.0kb upstream 1000 false Scaffold31002: 540574-541573 Brassica rapa FPsc
Brara.K00885 1.0kb downstream 1.0kb downstream 1924 true Scaffold31002: 538650-540573 Brassica rapa FPsc
Brara.K00885 1.0kb downstream 1.0kb downstream 1000 false Scaffold31002: 538650-539649 Brassica rapa FPsc
Brara.K00885 2.0kb upstream 2.0kb upstream 2924 true Scaffold31002: 539650-542573 Brassica rapa FPsc
Brara.K00885 2.0kb upstream 2.0kb upstream 2000 false Scaffold31002: 540574-542573 Brassica rapa FPsc
Brara.K00885 2.0kb downstream 2.0kb downstream 2924 true Scaffold31002: 537650-540573 Brassica rapa FPsc
Brara.K00885 2.0kb downstream 2.0kb downstream 2000 false Scaffold31002: 537650-539649 Brassica rapa FPsc
Brara.K00885 5.0kb upstream 5.0kb upstream 5924 true Scaffold31002: 539650-545573 Brassica rapa FPsc
Brara.K00885 5.0kb upstream 5.0kb upstream 5000 false Scaffold31002: 540574-545573 Brassica rapa FPsc
Brara.K00885 5.0kb downstream 5.0kb downstream 5924 true Scaffold31002: 534650-540573 Brassica rapa FPsc
Brara.K00885 5.0kb downstream 5.0kb downstream 5000 false Scaffold31002: 534650-539649 Brassica rapa FPsc
Brara.K00885 10.0kb upstream 10.0kb upstream 10924 true Scaffold31002: 539650-550573 Brassica rapa FPsc
Brara.K00885 10.0kb upstream 10.0kb upstream 10000 false Scaffold31002: 540574-550573 Brassica rapa FPsc
Brara.K00885 10.0kb downstream 10.0kb downstream 10924 true Scaffold31002: 529650-540573 Brassica rapa FPsc
Brara.K00885 10.0kb downstream 10.0kb downstream 10000 false Scaffold31002: 529650-539649 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381221 5261 Brassicaceae View MSA
123839427 5264 Brassicales-Malvales View MSA
124337492 5266 SBM View MSA
124238889 5268 Malvidae View MSA
124068161 5270 Rosid View MSA
123744425 5271 Pentapetalae View MSA
122793352 5272 Eudicot View MSA
122048037 5273 Angiosperm View MSA
121343942 5274 Embryophyte View MSA
123424852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier