Gene : Brara.K01400 B. rapa FPsc v1.3
Defline:  (1 of 10) PTHR31080:SF2 - F23N19.14-RELATED Genomic Order:  9
Name:  ? Brara.K01400 Secondary Identifier:  ? PAC:30614834
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1081 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01400 0.5kb upstream 0.5kb upstream 1100 true Scaffold63036: 34828-35927 Brassica rapa FPsc
Brara.K01400 0.5kb upstream 0.5kb upstream 500 false Scaffold63036: 34828-35327 Brassica rapa FPsc
Brara.K01400 0.5kb downstream 0.5kb downstream 1100 true Scaffold63036: 35328-36427 Brassica rapa FPsc
Brara.K01400 0.5kb downstream 0.5kb downstream 500 false Scaffold63036: 35928-36427 Brassica rapa FPsc
Brara.K01400 1.0kb upstream 1.0kb upstream 1600 true Scaffold63036: 34328-35927 Brassica rapa FPsc
Brara.K01400 1.0kb upstream 1.0kb upstream 1000 false Scaffold63036: 34328-35327 Brassica rapa FPsc
Brara.K01400 1.0kb downstream 1.0kb downstream 1600 true Scaffold63036: 35328-36927 Brassica rapa FPsc
Brara.K01400 1.0kb downstream 1.0kb downstream 1000 false Scaffold63036: 35928-36927 Brassica rapa FPsc
Brara.K01400 2.0kb upstream 2.0kb upstream 2600 true Scaffold63036: 33328-35927 Brassica rapa FPsc
Brara.K01400 2.0kb upstream 2.0kb upstream 2000 false Scaffold63036: 33328-35327 Brassica rapa FPsc
Brara.K01400 2.0kb downstream 2.0kb downstream 2600 true Scaffold63036: 35328-37927 Brassica rapa FPsc
Brara.K01400 2.0kb downstream 2.0kb downstream 2000 false Scaffold63036: 35928-37927 Brassica rapa FPsc
Brara.K01400 5.0kb upstream 5.0kb upstream 5600 true Scaffold63036: 30328-35927 Brassica rapa FPsc
Brara.K01400 5.0kb upstream 5.0kb upstream 5000 false Scaffold63036: 30328-35327 Brassica rapa FPsc
Brara.K01400 5.0kb downstream 5.0kb downstream 5600 true Scaffold63036: 35328-40927 Brassica rapa FPsc
Brara.K01400 5.0kb downstream 5.0kb downstream 5000 false Scaffold63036: 35928-40927 Brassica rapa FPsc
Brara.K01400 10.0kb upstream 10.0kb upstream 10600 true Scaffold63036: 25328-35927 Brassica rapa FPsc
Brara.K01400 10.0kb upstream 10.0kb upstream 10000 false Scaffold63036: 25328-35327 Brassica rapa FPsc
Brara.K01400 10.0kb downstream 10.0kb downstream 10600 true Scaffold63036: 35328-45927 Brassica rapa FPsc
Brara.K01400 10.0kb downstream 10.0kb downstream 10000 false Scaffold63036: 35928-45927 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362171 5261 Brassicaceae View MSA
123837730 5264 Brassicales-Malvales View MSA
124338445 5266 SBM View MSA
124251328 5268 Malvidae View MSA
124069066 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier