Gene : Brara.K01131 B. rapa FPsc v1.3

Defline:  (1 of 1) PTHR19139:SF151 - AQUAPORIN TIP1-3 Genomic Order:  2
Name:  ? Brara.K01131 Secondary Identifier:  ? PAC:30623225

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01131 0.5kb upstream 0.5kb upstream 1259 true Scaffold50473: 12884-14142 Brassica rapa FPsc
Brara.K01131 0.5kb upstream 0.5kb upstream 500 false Scaffold50473: 13643-14142 Brassica rapa FPsc
Brara.K01131 0.5kb downstream 0.5kb downstream 1259 true Scaffold50473: 12384-13642 Brassica rapa FPsc
Brara.K01131 0.5kb downstream 0.5kb downstream 500 false Scaffold50473: 12384-12883 Brassica rapa FPsc
Brara.K01131 1.0kb upstream 1.0kb upstream 1759 true Scaffold50473: 12884-14642 Brassica rapa FPsc
Brara.K01131 1.0kb upstream 1.0kb upstream 1000 false Scaffold50473: 13643-14642 Brassica rapa FPsc
Brara.K01131 1.0kb downstream 1.0kb downstream 1759 true Scaffold50473: 11884-13642 Brassica rapa FPsc
Brara.K01131 1.0kb downstream 1.0kb downstream 1000 false Scaffold50473: 11884-12883 Brassica rapa FPsc
Brara.K01131 2.0kb upstream 2.0kb upstream 2759 true Scaffold50473: 12884-15642 Brassica rapa FPsc
Brara.K01131 2.0kb upstream 2.0kb upstream 2000 false Scaffold50473: 13643-15642 Brassica rapa FPsc
Brara.K01131 2.0kb downstream 2.0kb downstream 2759 true Scaffold50473: 10884-13642 Brassica rapa FPsc
Brara.K01131 2.0kb downstream 2.0kb downstream 2000 false Scaffold50473: 10884-12883 Brassica rapa FPsc
Brara.K01131 5.0kb upstream 5.0kb upstream 5759 true Scaffold50473: 12884-18642 Brassica rapa FPsc
Brara.K01131 5.0kb upstream 5.0kb upstream 5000 false Scaffold50473: 13643-18642 Brassica rapa FPsc
Brara.K01131 5.0kb downstream 5.0kb downstream 5759 true Scaffold50473: 7884-13642 Brassica rapa FPsc
Brara.K01131 5.0kb downstream 5.0kb downstream 5000 false Scaffold50473: 7884-12883 Brassica rapa FPsc
Brara.K01131 10.0kb upstream 10.0kb upstream 10759 true Scaffold50473: 12884-23642 Brassica rapa FPsc
Brara.K01131 10.0kb upstream 10.0kb upstream 10000 false Scaffold50473: 13643-23642 Brassica rapa FPsc
Brara.K01131 10.0kb downstream 10.0kb downstream 10759 true Scaffold50473: 2884-13642 Brassica rapa FPsc
Brara.K01131 10.0kb downstream 10.0kb downstream 10000 false Scaffold50473: 2884-12883 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372388 5261 Brassicaceae View MSA
123829382 5264 Brassicales-Malvales View MSA
124338701 5266 SBM View MSA
124246223 5268 Malvidae View MSA
124069890 5270 Rosid View MSA
123746940 5271 Pentapetalae View MSA
122797450 5272 Eudicot View MSA
122043160 5273 Angiosperm View MSA
121351438 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier