Gene : Brara.K01729 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR31549:SF3 - EMB Genomic Order:  1
Name:  ? Brara.K01729 Secondary Identifier:  ? PAC:30614986
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01729 0.5kb upstream 0.5kb upstream 1058 true Scaffold86616: 6-1063 Brassica rapa FPsc
Brara.K01729 0.5kb upstream 0.5kb upstream 500 false Scaffold86616: 564-1063 Brassica rapa FPsc
Brara.K01729 0.5kb downstream 0.5kb downstream 563 true Scaffold86616: 1-563 Brassica rapa FPsc
Brara.K01729 0.5kb downstream 0.5kb downstream 5 false Scaffold86616: 1-5 Brassica rapa FPsc
Brara.K01729 1.0kb upstream 1.0kb upstream 1558 true Scaffold86616: 6-1563 Brassica rapa FPsc
Brara.K01729 1.0kb upstream 1.0kb upstream 1000 false Scaffold86616: 564-1563 Brassica rapa FPsc
Brara.K01729 1.0kb downstream 1.0kb downstream 563 true Scaffold86616: 1-563 Brassica rapa FPsc
Brara.K01729 1.0kb downstream 1.0kb downstream 5 false Scaffold86616: 1-5 Brassica rapa FPsc
Brara.K01729 2.0kb upstream 2.0kb upstream 2446 true Scaffold86616: 6-2451 Brassica rapa FPsc
Brara.K01729 2.0kb upstream 2.0kb upstream 1888 false Scaffold86616: 564-2451 Brassica rapa FPsc
Brara.K01729 2.0kb downstream 2.0kb downstream 563 true Scaffold86616: 1-563 Brassica rapa FPsc
Brara.K01729 2.0kb downstream 2.0kb downstream 5 false Scaffold86616: 1-5 Brassica rapa FPsc
Brara.K01729 5.0kb upstream 5.0kb upstream 2446 true Scaffold86616: 6-2451 Brassica rapa FPsc
Brara.K01729 5.0kb upstream 5.0kb upstream 1888 false Scaffold86616: 564-2451 Brassica rapa FPsc
Brara.K01729 5.0kb downstream 5.0kb downstream 563 true Scaffold86616: 1-563 Brassica rapa FPsc
Brara.K01729 5.0kb downstream 5.0kb downstream 5 false Scaffold86616: 1-5 Brassica rapa FPsc
Brara.K01729 10.0kb upstream 10.0kb upstream 2446 true Scaffold86616: 6-2451 Brassica rapa FPsc
Brara.K01729 10.0kb upstream 10.0kb upstream 1888 false Scaffold86616: 564-2451 Brassica rapa FPsc
Brara.K01729 10.0kb downstream 10.0kb downstream 563 true Scaffold86616: 1-563 Brassica rapa FPsc
Brara.K01729 10.0kb downstream 10.0kb downstream 5 false Scaffold86616: 1-5 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122346818 5261 Brassicaceae Singleton cluster - no MSA
123786453 5264 Brassicales-Malvales Singleton cluster - no MSA
124350609 5266 SBM View MSA
124251832 5268 Malvidae View MSA
124074599 5270 Rosid View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier