Gene : Brara.A00088 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR22808 - NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING Genomic Order:  88
Name:  ? Brara.A00088 Secondary Identifier:  ? PAC:30640026
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6829 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A00088 0.5kb upstream 0.5kb upstream 3992 true A01: 466555-470546 Brassica rapa FPsc
Brara.A00088 0.5kb upstream 0.5kb upstream 500 false A01: 470047-470546 Brassica rapa FPsc
Brara.A00088 0.5kb downstream 0.5kb downstream 3992 true A01: 466055-470046 Brassica rapa FPsc
Brara.A00088 0.5kb downstream 0.5kb downstream 500 false A01: 466055-466554 Brassica rapa FPsc
Brara.A00088 1.0kb upstream 1.0kb upstream 4492 true A01: 466555-471046 Brassica rapa FPsc
Brara.A00088 1.0kb upstream 1.0kb upstream 1000 false A01: 470047-471046 Brassica rapa FPsc
Brara.A00088 1.0kb downstream 1.0kb downstream 4492 true A01: 465555-470046 Brassica rapa FPsc
Brara.A00088 1.0kb downstream 1.0kb downstream 1000 false A01: 465555-466554 Brassica rapa FPsc
Brara.A00088 2.0kb upstream 2.0kb upstream 5492 true A01: 466555-472046 Brassica rapa FPsc
Brara.A00088 2.0kb upstream 2.0kb upstream 2000 false A01: 470047-472046 Brassica rapa FPsc
Brara.A00088 2.0kb downstream 2.0kb downstream 5492 true A01: 464555-470046 Brassica rapa FPsc
Brara.A00088 2.0kb downstream 2.0kb downstream 2000 false A01: 464555-466554 Brassica rapa FPsc
Brara.A00088 5.0kb upstream 5.0kb upstream 8492 true A01: 466555-475046 Brassica rapa FPsc
Brara.A00088 5.0kb upstream 5.0kb upstream 5000 false A01: 470047-475046 Brassica rapa FPsc
Brara.A00088 5.0kb downstream 5.0kb downstream 8492 true A01: 461555-470046 Brassica rapa FPsc
Brara.A00088 5.0kb downstream 5.0kb downstream 5000 false A01: 461555-466554 Brassica rapa FPsc
Brara.A00088 10.0kb upstream 10.0kb upstream 13492 true A01: 466555-480046 Brassica rapa FPsc
Brara.A00088 10.0kb upstream 10.0kb upstream 10000 false A01: 470047-480046 Brassica rapa FPsc
Brara.A00088 10.0kb downstream 10.0kb downstream 13492 true A01: 456555-470046 Brassica rapa FPsc
Brara.A00088 10.0kb downstream 10.0kb downstream 10000 false A01: 456555-466554 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368529 5261 Brassicaceae View MSA
123799592 5264 Brassicales-Malvales View MSA
124297094 5266 SBM View MSA
124251065 5268 Malvidae View MSA
123952562 5270 Rosid View MSA
123530294 5271 Pentapetalae View MSA
122565260 5272 Eudicot View MSA
122043899 5273 Angiosperm View MSA
121349940 5274 Embryophyte View MSA
123426394 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier