Gene : Brara.A00101 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11062:SF63 - EXOSTOSIN FAMILY PROTEIN Genomic Order:  101
Name:  ? Brara.A00101 Secondary Identifier:  ? PAC:30636575
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5980 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A00101 0.5kb upstream 0.5kb upstream 2294 true A01: 508766-511059 Brassica rapa FPsc
Brara.A00101 0.5kb upstream 0.5kb upstream 500 false A01: 510560-511059 Brassica rapa FPsc
Brara.A00101 0.5kb downstream 0.5kb downstream 2294 true A01: 508266-510559 Brassica rapa FPsc
Brara.A00101 0.5kb downstream 0.5kb downstream 500 false A01: 508266-508765 Brassica rapa FPsc
Brara.A00101 1.0kb upstream 1.0kb upstream 2794 true A01: 508766-511559 Brassica rapa FPsc
Brara.A00101 1.0kb upstream 1.0kb upstream 1000 false A01: 510560-511559 Brassica rapa FPsc
Brara.A00101 1.0kb downstream 1.0kb downstream 2794 true A01: 507766-510559 Brassica rapa FPsc
Brara.A00101 1.0kb downstream 1.0kb downstream 1000 false A01: 507766-508765 Brassica rapa FPsc
Brara.A00101 2.0kb upstream 2.0kb upstream 3794 true A01: 508766-512559 Brassica rapa FPsc
Brara.A00101 2.0kb upstream 2.0kb upstream 2000 false A01: 510560-512559 Brassica rapa FPsc
Brara.A00101 2.0kb downstream 2.0kb downstream 3794 true A01: 506766-510559 Brassica rapa FPsc
Brara.A00101 2.0kb downstream 2.0kb downstream 2000 false A01: 506766-508765 Brassica rapa FPsc
Brara.A00101 5.0kb upstream 5.0kb upstream 6794 true A01: 508766-515559 Brassica rapa FPsc
Brara.A00101 5.0kb upstream 5.0kb upstream 5000 false A01: 510560-515559 Brassica rapa FPsc
Brara.A00101 5.0kb downstream 5.0kb downstream 6794 true A01: 503766-510559 Brassica rapa FPsc
Brara.A00101 5.0kb downstream 5.0kb downstream 5000 false A01: 503766-508765 Brassica rapa FPsc
Brara.A00101 10.0kb upstream 10.0kb upstream 11794 true A01: 508766-520559 Brassica rapa FPsc
Brara.A00101 10.0kb upstream 10.0kb upstream 10000 false A01: 510560-520559 Brassica rapa FPsc
Brara.A00101 10.0kb downstream 10.0kb downstream 11794 true A01: 498766-510559 Brassica rapa FPsc
Brara.A00101 10.0kb downstream 10.0kb downstream 10000 false A01: 498766-508765 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369727 5261 Brassicaceae View MSA
123834330 5264 Brassicales-Malvales View MSA
124350181 5266 SBM View MSA
124254213 5268 Malvidae View MSA
124072198 5270 Rosid View MSA
123751032 5271 Pentapetalae View MSA
122797278 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier