Gene : Brara.A00119 B. rapa FPsc v1.3
Defline:  (1 of 13) 4.4.1.14 - 1-aminocyclopropane-1-carboxylate synthase / S-adenosyl-L-methionine methylthioadenosine-lyase Genomic Order:  119
Name:  ? Brara.A00119 Secondary Identifier:  ? PAC:30637789
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ETHYL-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7270 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A00119 0.5kb upstream 0.5kb upstream 2512 true A01: 624086-626597 Brassica rapa FPsc
Brara.A00119 0.5kb upstream 0.5kb upstream 500 false A01: 626098-626597 Brassica rapa FPsc
Brara.A00119 0.5kb downstream 0.5kb downstream 2512 true A01: 623586-626097 Brassica rapa FPsc
Brara.A00119 0.5kb downstream 0.5kb downstream 500 false A01: 623586-624085 Brassica rapa FPsc
Brara.A00119 1.0kb upstream 1.0kb upstream 3012 true A01: 624086-627097 Brassica rapa FPsc
Brara.A00119 1.0kb upstream 1.0kb upstream 1000 false A01: 626098-627097 Brassica rapa FPsc
Brara.A00119 1.0kb downstream 1.0kb downstream 3012 true A01: 623086-626097 Brassica rapa FPsc
Brara.A00119 1.0kb downstream 1.0kb downstream 1000 false A01: 623086-624085 Brassica rapa FPsc
Brara.A00119 2.0kb upstream 2.0kb upstream 4012 true A01: 624086-628097 Brassica rapa FPsc
Brara.A00119 2.0kb upstream 2.0kb upstream 2000 false A01: 626098-628097 Brassica rapa FPsc
Brara.A00119 2.0kb downstream 2.0kb downstream 4012 true A01: 622086-626097 Brassica rapa FPsc
Brara.A00119 2.0kb downstream 2.0kb downstream 2000 false A01: 622086-624085 Brassica rapa FPsc
Brara.A00119 5.0kb upstream 5.0kb upstream 7012 true A01: 624086-631097 Brassica rapa FPsc
Brara.A00119 5.0kb upstream 5.0kb upstream 5000 false A01: 626098-631097 Brassica rapa FPsc
Brara.A00119 5.0kb downstream 5.0kb downstream 7012 true A01: 619086-626097 Brassica rapa FPsc
Brara.A00119 5.0kb downstream 5.0kb downstream 5000 false A01: 619086-624085 Brassica rapa FPsc
Brara.A00119 10.0kb upstream 10.0kb upstream 12012 true A01: 624086-636097 Brassica rapa FPsc
Brara.A00119 10.0kb upstream 10.0kb upstream 10000 false A01: 626098-636097 Brassica rapa FPsc
Brara.A00119 10.0kb downstream 10.0kb downstream 12012 true A01: 614086-626097 Brassica rapa FPsc
Brara.A00119 10.0kb downstream 10.0kb downstream 10000 false A01: 614086-624085 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366718 5261 Brassicaceae View MSA
123836174 5264 Brassicales-Malvales View MSA
124340676 5266 SBM View MSA
124247956 5268 Malvidae View MSA
124066319 5270 Rosid View MSA
123745403 5271 Pentapetalae View MSA
122791160 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier