Gene : Brara.A00004 B. rapa FPsc v1.3

Defline:  (1 of 1) PTHR31867:SF7 - EXPANSIN-A20 Genomic Order:  4
Name:  ? Brara.A00004 Secondary Identifier:  ? PAC:30639281

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A00004 0.5kb upstream 0.5kb upstream 1736 true A01: 21752-23487 Brassica rapa FPsc
Brara.A00004 0.5kb upstream 0.5kb upstream 500 false A01: 21752-22251 Brassica rapa FPsc
Brara.A00004 0.5kb downstream 0.5kb downstream 1736 true A01: 22252-23987 Brassica rapa FPsc
Brara.A00004 0.5kb downstream 0.5kb downstream 500 false A01: 23488-23987 Brassica rapa FPsc
Brara.A00004 1.0kb upstream 1.0kb upstream 2236 true A01: 21252-23487 Brassica rapa FPsc
Brara.A00004 1.0kb upstream 1.0kb upstream 1000 false A01: 21252-22251 Brassica rapa FPsc
Brara.A00004 1.0kb downstream 1.0kb downstream 2236 true A01: 22252-24487 Brassica rapa FPsc
Brara.A00004 1.0kb downstream 1.0kb downstream 1000 false A01: 23488-24487 Brassica rapa FPsc
Brara.A00004 2.0kb upstream 2.0kb upstream 3236 true A01: 20252-23487 Brassica rapa FPsc
Brara.A00004 2.0kb upstream 2.0kb upstream 2000 false A01: 20252-22251 Brassica rapa FPsc
Brara.A00004 2.0kb downstream 2.0kb downstream 3236 true A01: 22252-25487 Brassica rapa FPsc
Brara.A00004 2.0kb downstream 2.0kb downstream 2000 false A01: 23488-25487 Brassica rapa FPsc
Brara.A00004 5.0kb upstream 5.0kb upstream 6236 true A01: 17252-23487 Brassica rapa FPsc
Brara.A00004 5.0kb upstream 5.0kb upstream 5000 false A01: 17252-22251 Brassica rapa FPsc
Brara.A00004 5.0kb downstream 5.0kb downstream 6236 true A01: 22252-28487 Brassica rapa FPsc
Brara.A00004 5.0kb downstream 5.0kb downstream 5000 false A01: 23488-28487 Brassica rapa FPsc
Brara.A00004 10.0kb upstream 10.0kb upstream 11236 true A01: 12252-23487 Brassica rapa FPsc
Brara.A00004 10.0kb upstream 10.0kb upstream 10000 false A01: 12252-22251 Brassica rapa FPsc
Brara.A00004 10.0kb downstream 10.0kb downstream 11236 true A01: 22252-33487 Brassica rapa FPsc
Brara.A00004 10.0kb downstream 10.0kb downstream 10000 false A01: 23488-33487 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365737 5261 Brassicaceae View MSA
123829739 5264 Brassicales-Malvales View MSA
124341047 5266 SBM View MSA
124238174 5268 Malvidae View MSA
124065667 5270 Rosid View MSA
123746743 5271 Pentapetalae View MSA
122791118 5272 Eudicot View MSA
122045799 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121310504 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier