Gene : Brara.A00201 B. rapa FPsc v1.3
Defline:  (1 of 1) KOG0124 - Polypyrimidine tract-binding protein PUF60 (RRM superfamily) Genomic Order:  201
Name:  ? Brara.A00201 Secondary Identifier:  ? PAC:30636700
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A00201 0.5kb upstream 0.5kb upstream 2442 true A01: 1074141-1076582 Brassica rapa FPsc
Brara.A00201 0.5kb upstream 0.5kb upstream 500 false A01: 1074141-1074640 Brassica rapa FPsc
Brara.A00201 0.5kb downstream 0.5kb downstream 2442 true A01: 1074641-1077082 Brassica rapa FPsc
Brara.A00201 0.5kb downstream 0.5kb downstream 500 false A01: 1076583-1077082 Brassica rapa FPsc
Brara.A00201 1.0kb upstream 1.0kb upstream 2942 true A01: 1073641-1076582 Brassica rapa FPsc
Brara.A00201 1.0kb upstream 1.0kb upstream 1000 false A01: 1073641-1074640 Brassica rapa FPsc
Brara.A00201 1.0kb downstream 1.0kb downstream 2942 true A01: 1074641-1077582 Brassica rapa FPsc
Brara.A00201 1.0kb downstream 1.0kb downstream 1000 false A01: 1076583-1077582 Brassica rapa FPsc
Brara.A00201 2.0kb upstream 2.0kb upstream 3942 true A01: 1072641-1076582 Brassica rapa FPsc
Brara.A00201 2.0kb upstream 2.0kb upstream 2000 false A01: 1072641-1074640 Brassica rapa FPsc
Brara.A00201 2.0kb downstream 2.0kb downstream 3942 true A01: 1074641-1078582 Brassica rapa FPsc
Brara.A00201 2.0kb downstream 2.0kb downstream 2000 false A01: 1076583-1078582 Brassica rapa FPsc
Brara.A00201 5.0kb upstream 5.0kb upstream 6942 true A01: 1069641-1076582 Brassica rapa FPsc
Brara.A00201 5.0kb upstream 5.0kb upstream 5000 false A01: 1069641-1074640 Brassica rapa FPsc
Brara.A00201 5.0kb downstream 5.0kb downstream 6942 true A01: 1074641-1081582 Brassica rapa FPsc
Brara.A00201 5.0kb downstream 5.0kb downstream 5000 false A01: 1076583-1081582 Brassica rapa FPsc
Brara.A00201 10.0kb upstream 10.0kb upstream 11942 true A01: 1064641-1076582 Brassica rapa FPsc
Brara.A00201 10.0kb upstream 10.0kb upstream 10000 false A01: 1064641-1074640 Brassica rapa FPsc
Brara.A00201 10.0kb downstream 10.0kb downstream 11942 true A01: 1074641-1086582 Brassica rapa FPsc
Brara.A00201 10.0kb downstream 10.0kb downstream 10000 false A01: 1076583-1086582 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352244 5261 Brassicaceae Singleton cluster - no MSA
123791009 5264 Brassicales-Malvales Singleton cluster - no MSA
124288937 5266 SBM Singleton cluster - no MSA
124255889 5268 Malvidae View MSA
124075170 5270 Rosid View MSA
123749949 5271 Pentapetalae View MSA
122795253 5272 Eudicot View MSA
122050030 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349493 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier