Gene : Brara.A00476 B. rapa FPsc v1.3
Defline:  (1 of 1) 1.5.1.7 - Saccharopine dehydrogenase (NAD(+), L-lysine-forming) / Lysine-2-oxoglutarate reductase Genomic Order:  476
Name:  ? Brara.A00476 Secondary Identifier:  ? PAC:30638884
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc LYSINE-DEG1-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A00476 0.5kb upstream 0.5kb upstream 6981 true A01: 2305171-2312151 Brassica rapa FPsc
Brara.A00476 0.5kb upstream 0.5kb upstream 500 false A01: 2305171-2305670 Brassica rapa FPsc
Brara.A00476 0.5kb downstream 0.5kb downstream 6981 true A01: 2305671-2312651 Brassica rapa FPsc
Brara.A00476 0.5kb downstream 0.5kb downstream 500 false A01: 2312152-2312651 Brassica rapa FPsc
Brara.A00476 1.0kb upstream 1.0kb upstream 7481 true A01: 2304671-2312151 Brassica rapa FPsc
Brara.A00476 1.0kb upstream 1.0kb upstream 1000 false A01: 2304671-2305670 Brassica rapa FPsc
Brara.A00476 1.0kb downstream 1.0kb downstream 7481 true A01: 2305671-2313151 Brassica rapa FPsc
Brara.A00476 1.0kb downstream 1.0kb downstream 1000 false A01: 2312152-2313151 Brassica rapa FPsc
Brara.A00476 2.0kb upstream 2.0kb upstream 8481 true A01: 2303671-2312151 Brassica rapa FPsc
Brara.A00476 2.0kb upstream 2.0kb upstream 2000 false A01: 2303671-2305670 Brassica rapa FPsc
Brara.A00476 2.0kb downstream 2.0kb downstream 8481 true A01: 2305671-2314151 Brassica rapa FPsc
Brara.A00476 2.0kb downstream 2.0kb downstream 2000 false A01: 2312152-2314151 Brassica rapa FPsc
Brara.A00476 5.0kb upstream 5.0kb upstream 11481 true A01: 2300671-2312151 Brassica rapa FPsc
Brara.A00476 5.0kb upstream 5.0kb upstream 5000 false A01: 2300671-2305670 Brassica rapa FPsc
Brara.A00476 5.0kb downstream 5.0kb downstream 11481 true A01: 2305671-2317151 Brassica rapa FPsc
Brara.A00476 5.0kb downstream 5.0kb downstream 5000 false A01: 2312152-2317151 Brassica rapa FPsc
Brara.A00476 10.0kb upstream 10.0kb upstream 16481 true A01: 2295671-2312151 Brassica rapa FPsc
Brara.A00476 10.0kb upstream 10.0kb upstream 10000 false A01: 2295671-2305670 Brassica rapa FPsc
Brara.A00476 10.0kb downstream 10.0kb downstream 16481 true A01: 2305671-2322151 Brassica rapa FPsc
Brara.A00476 10.0kb downstream 10.0kb downstream 10000 false A01: 2312152-2322151 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374841 5261 Brassicaceae View MSA
123837838 5264 Brassicales-Malvales View MSA
124346514 5266 SBM View MSA
124249986 5268 Malvidae View MSA
124068901 5270 Rosid View MSA
123736723 5271 Pentapetalae View MSA
122787907 5272 Eudicot View MSA
122047432 5273 Angiosperm View MSA
121344808 5274 Embryophyte View MSA
123380103 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier