Gene : Brara.A00490 B. rapa FPsc v1.3
Defline:  (1 of 1) 1.4.4.2 - Glycine dehydrogenase (aminomethyl-transferring) / Glycine-cleavage complex P-protein Genomic Order:  490
Name:  ? Brara.A00490 Secondary Identifier:  ? PAC:30639403
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLYCINE-SYN2-PWY Brassica rapa FPsc pathologic  
BrapaFPsc GLYCLEAV-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A00490 0.5kb upstream 0.5kb upstream 5133 true A01: 2368582-2373714 Brassica rapa FPsc
Brara.A00490 0.5kb upstream 0.5kb upstream 500 false A01: 2368582-2369081 Brassica rapa FPsc
Brara.A00490 0.5kb downstream 0.5kb downstream 5133 true A01: 2369082-2374214 Brassica rapa FPsc
Brara.A00490 0.5kb downstream 0.5kb downstream 500 false A01: 2373715-2374214 Brassica rapa FPsc
Brara.A00490 1.0kb upstream 1.0kb upstream 5633 true A01: 2368082-2373714 Brassica rapa FPsc
Brara.A00490 1.0kb upstream 1.0kb upstream 1000 false A01: 2368082-2369081 Brassica rapa FPsc
Brara.A00490 1.0kb downstream 1.0kb downstream 5633 true A01: 2369082-2374714 Brassica rapa FPsc
Brara.A00490 1.0kb downstream 1.0kb downstream 1000 false A01: 2373715-2374714 Brassica rapa FPsc
Brara.A00490 2.0kb upstream 2.0kb upstream 6633 true A01: 2367082-2373714 Brassica rapa FPsc
Brara.A00490 2.0kb upstream 2.0kb upstream 2000 false A01: 2367082-2369081 Brassica rapa FPsc
Brara.A00490 2.0kb downstream 2.0kb downstream 6633 true A01: 2369082-2375714 Brassica rapa FPsc
Brara.A00490 2.0kb downstream 2.0kb downstream 2000 false A01: 2373715-2375714 Brassica rapa FPsc
Brara.A00490 5.0kb upstream 5.0kb upstream 9633 true A01: 2364082-2373714 Brassica rapa FPsc
Brara.A00490 5.0kb upstream 5.0kb upstream 5000 false A01: 2364082-2369081 Brassica rapa FPsc
Brara.A00490 5.0kb downstream 5.0kb downstream 9633 true A01: 2369082-2378714 Brassica rapa FPsc
Brara.A00490 5.0kb downstream 5.0kb downstream 5000 false A01: 2373715-2378714 Brassica rapa FPsc
Brara.A00490 10.0kb upstream 10.0kb upstream 14633 true A01: 2359082-2373714 Brassica rapa FPsc
Brara.A00490 10.0kb upstream 10.0kb upstream 10000 false A01: 2359082-2369081 Brassica rapa FPsc
Brara.A00490 10.0kb downstream 10.0kb downstream 14633 true A01: 2369082-2383714 Brassica rapa FPsc
Brara.A00490 10.0kb downstream 10.0kb downstream 10000 false A01: 2373715-2383714 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371110 5261 Brassicaceae View MSA
123828979 5264 Brassicales-Malvales View MSA
124346734 5266 SBM View MSA
124253029 5268 Malvidae View MSA
124061980 5270 Rosid View MSA
123750406 5271 Pentapetalae View MSA
122792925 5272 Eudicot View MSA
122042189 5273 Angiosperm View MSA
121346378 5274 Embryophyte View MSA
123424003 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier