Gene : Brara.A00825 B. rapa FPsc v1.3
Defline:  (1 of 4) 1.1.1.35//4.2.1.17//5.1.2.3//5.3.3.8 - 3-hydroxyacyl-CoA dehydrogenase / Beta-keto-reductase // Enoyl-CoA hydratase / Unsaturated acyl-CoA hydratase // Dodecenoyl-CoA isomerase / Dodecenoyl-CoA Delta-isomerase Genomic Order:  825
Name:  ? Brara.A00825 Secondary Identifier:  ? PAC:30640224
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Sequence Feature Displayer

Ontology Annotation Displayer

11 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ILEUDEG-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5136 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5137 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5138 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6435 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6837 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7036 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-735 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7606 Brassica rapa FPsc pathologic  
BrapaFPsc VALDEG-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A00825 0.5kb upstream 0.5kb upstream 5278 true A01: 4165562-4170839 Brassica rapa FPsc
Brara.A00825 0.5kb upstream 0.5kb upstream 500 false A01: 4165562-4166061 Brassica rapa FPsc
Brara.A00825 0.5kb downstream 0.5kb downstream 5278 true A01: 4166062-4171339 Brassica rapa FPsc
Brara.A00825 0.5kb downstream 0.5kb downstream 500 false A01: 4170840-4171339 Brassica rapa FPsc
Brara.A00825 1.0kb upstream 1.0kb upstream 5778 true A01: 4165062-4170839 Brassica rapa FPsc
Brara.A00825 1.0kb upstream 1.0kb upstream 1000 false A01: 4165062-4166061 Brassica rapa FPsc
Brara.A00825 1.0kb downstream 1.0kb downstream 5778 true A01: 4166062-4171839 Brassica rapa FPsc
Brara.A00825 1.0kb downstream 1.0kb downstream 1000 false A01: 4170840-4171839 Brassica rapa FPsc
Brara.A00825 2.0kb upstream 2.0kb upstream 6778 true A01: 4164062-4170839 Brassica rapa FPsc
Brara.A00825 2.0kb upstream 2.0kb upstream 2000 false A01: 4164062-4166061 Brassica rapa FPsc
Brara.A00825 2.0kb downstream 2.0kb downstream 6778 true A01: 4166062-4172839 Brassica rapa FPsc
Brara.A00825 2.0kb downstream 2.0kb downstream 2000 false A01: 4170840-4172839 Brassica rapa FPsc
Brara.A00825 5.0kb upstream 5.0kb upstream 9778 true A01: 4161062-4170839 Brassica rapa FPsc
Brara.A00825 5.0kb upstream 5.0kb upstream 5000 false A01: 4161062-4166061 Brassica rapa FPsc
Brara.A00825 5.0kb downstream 5.0kb downstream 9778 true A01: 4166062-4175839 Brassica rapa FPsc
Brara.A00825 5.0kb downstream 5.0kb downstream 5000 false A01: 4170840-4175839 Brassica rapa FPsc
Brara.A00825 10.0kb upstream 10.0kb upstream 14778 true A01: 4156062-4170839 Brassica rapa FPsc
Brara.A00825 10.0kb upstream 10.0kb upstream 10000 false A01: 4156062-4166061 Brassica rapa FPsc
Brara.A00825 10.0kb downstream 10.0kb downstream 14778 true A01: 4166062-4180839 Brassica rapa FPsc
Brara.A00825 10.0kb downstream 10.0kb downstream 10000 false A01: 4170840-4180839 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375346 5261 Brassicaceae View MSA
123827645 5264 Brassicales-Malvales View MSA
124340357 5266 SBM View MSA
124241390 5268 Malvidae View MSA
124067540 5270 Rosid View MSA
123736586 5271 Pentapetalae View MSA
122787212 5272 Eudicot View MSA
122047578 5273 Angiosperm View MSA
121310763 5274 Embryophyte View MSA
123348170 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier